KEGG   Acinetobacter chinensis: CDG60_02260
Entry
CDG60_02260       CDS       T06795                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
achi  Acinetobacter chinensis
Pathway
achi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:achi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CDG60_02260 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:achi03021]
    CDG60_02260 (rpoB)
   03400 DNA repair and recombination proteins [BR:achi03400]
    CDG60_02260 (rpoB)
Enzymes [BR:achi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CDG60_02260 (rpoB)
Transcription machinery [BR:achi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CDG60_02260 (rpoB)
DNA repair and recombination proteins [BR:achi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CDG60_02260 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RelB DOCK-C2
Other DBs
NCBI-ProteinID: AXY55523
UniProt: A0A346CFR1
Position
303751..307839
AA seq 1362 aa
MAYSYTEKKRIRKNFGKLPSVMDAPYLLAIQVDSYRTFLQGGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYSNEQILEMFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIVDNDGKAIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AEDITLHNGDVIAANTVLSHEIMVKIAEGGIKQFNILFTNDIDRGPFIADSLRADTTSGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSTERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNADITDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSIVDKEGNLQEEFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMEANVAHD
SGVCVIAKRGGRIEFVDASRVVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQKVLV
SLGDKVGRGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGIEKDERAQAIEKS
QLDSYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGTTRRGDKLTEDLLSGLELVDLLE
VQPVDEGIAERLTQIQVFLKEKSIEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDIHGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEKIDKMLQQQRTVIELREFLDKIYNKVGGEQEDLDSLTDDEILVLSGNLRKGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLYDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccgagc
gtcatggacgctccgtacttgctcgcgattcaagttgactcgtacagaacgttcttacaa
ggcggcaaaacaccaaaaaatcgcgaagatatcggtcttcaagctgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctttagaatttgttgagtatagtcttggt
aagcctgagtttgacgttcgcgaatgtattcttcgtggctcaacttatgcagcaccaatg
cgcgtaaaaattcgtctgatcattaaagatcgcgaaaccaagtcgattaaagacgtacgc
gagcaggaagtgtacatgggtgaaatgccactcatgactgagaatggtacttttgtgatc
aacggtactgagcgtgtaatcgtatctcagttacaccgttcacctggtgtgttcttcgat
catgacaaaggcaaaacgcattccagcggtaaagtgctttattcagcacgtatcattcct
taccgtggttcatggttagactttgagtttgatgccaaagatctggtatatgttcgtatt
gaccgtcgtcgtaaactgcttgcaacagttgttttacgtgcactgggttacagcaacgaa
cagatcctggaaatgttctacgagaaagtacctgtttacctggatatgggcagctaccag
attgacctggtgcctgaacgtcttcgtggtgaaatggcgcagttcgatattgttgacaat
gatggtaaagcgatcgttgaacagggtaaacgtattaatgcacgtcatgtacgtcagatg
gaagctgcgggtttaactaagctttctgtacctgatgaatacctgtatgagcgtattact
gctgaagatatcactttacataatggtgatgtgattgctgccaatactgtgcttagccat
gaaatcatggtgaaaattgcagaaggcggaatcaagcagttcaatatcctgtttaccaat
gacattgaccgtggtccgttcattgcagactctttacgtgcagatacaacatccggtcgt
gaagaagcacttgtagaaatctacaaagtgatgcgtccaggtgagccaccgactaaagaa
gcagctgaaaatctgttcaataacttattcttctcaactgagcgttatgacttatcgcca
gtgggtcgtatgaagttcaaccgtcgtctgggtcgtccatacgaagtcggtacagatcag
aaatcacgtgaagttgaaggtattctgtctaacgcagacattacagacgtactgaaaaca
ctggttgaaatccgtaacggtaaaggcgaagtcgatgatatcgatcacctgggtaaccgt
cgtgtacgttcagttggtgaaatgacagaaaaccagttccgtgtaggtctggtacgtgtt
gaacgtgcggtaaaagagcgtttatcacaggctgaaacagataacctgtctccacaggat
ctgatcaatgcaaaacctgttgcagctgcaatcaaagaattctttggttcaagccagttg
tctcaattcatggatcagaacaacccattgtctgaaattacacacaaacgtcgtgtatca
gcgctcggtcctggtggtctgacacgtgaacgtgcaggctttgaagtacgtgacgtacat
cagactcactacggtcgtgtatgtccgattgagactcctgaaggtccaaacattggtttg
atcaactcactttcagtttatgcgaaatgtaataacttcggtttcctggaaactccatac
cgtaaagttgttgatggtcgtgtaacggatgatgttgaatatttatctgcgattgaagaa
gtgggtactgtgattgcacaggccgattcgattgttgataaagaaggtaatttacaggaa
gaattcgtatctgtacgtcaccagggcgacttcgtacgtatgcctcctgaaaaagtaacg
catatggatgtatctgctcagcaggttgtatctgttgctgcgtcactgattccgttcctt
gaacacgatgatgccaaccgtgcattgatgggttcaaacatgcagcgtcaggctgttcct
acattgcttgctgacaaaccattggttggtactggtatggaagcaaacgtagcgcacgac
tctggtgtgtgtgtgattgcgaaacgtggcggacgtatcgagtttgttgatgcttcccgt
gtggttatccgtgttaatgaagacgaaatgatcgctggtgaagcaggtgtggatatctac
aacctgattaaatacacccgttcgaaccagaacacctgtatcaaccagaaagtgcttgta
agcctgggtgataaagtaggtcgtggtgatgttcttgctgatggtccatcgactgacggt
ggtgaacttgcacttggtcagaacatgcgcgtcgcgttcatgacctggaacggttataac
tacgaagattcgatcttactttctgagcgtgtgcttcaggaagatcgtctgacttcgatt
catattcaggaactgtcatgtgtagcacgtgataccaagttaggtgcagaagaaattact
gctgatattcctaacgtgggtgaagctgcgctgtctaagctggatgaatcaggtattgtt
tacattggtgctgaagtaactgcgggtgacatccttgttggtaaggtaacacctaaaggc
gaaacgcaattaacaccggaagaaaaactgcttcgtgcaatcttcggtgaaaaagcagct
gatgttaaagactcgtctttacgcgttccatcaggtacgaaaggtactgtgattgatgtt
caggtgtttacacgtgatggcatcgaaaaagatgaacgtgctcaggcaattgaaaaatct
cagcttgattcttaccgtaaagatctgaaagaagaatataaaatattcgaagaagctgct
cgtgaacgtattgttcgcttgttgaaaggtcaggaatccaacggtggtggtacaacacgt
cgtggtgacaaactgactgaagatctgttgtcaggtcttgagctggttgatctgcttgaa
gtacagcctgtagatgaaggtattgcagagcgtctgactcagatccaggtattcctgaaa
gaaaagagcattgaaattgatgagaagtttgctgagaaaaaacgcaaactttctacaggt
gatgaactgacaacgggcgtactgaaagttgttaaagtttacttagctgttaaacgtcgt
attcagcctggtgataaaatggcgggtcgtcacgggaacaagggtgttgtatccaacatt
ctgcctgtagaagatatgccgcatgatatccatggtgtgcctgttgatatcgtgttgaat
ccactgggtgtaccatcacgtatgaacgtgggtcagattctcgaaactcacctgggtatg
gcagcaaaaggtctgggcgaaaaaattgacaagatgttgcagcagcagcgtactgttatt
gaattacgtgaattcctggacaagatctataacaaagttggtggtgagcaggaagacctg
gacagcctgactgatgatgagatcctggttctgtctggtaacctgcgtaaaggtgttcca
ttagcgactccagtatttgatggtgctgaagaaagtcagatcaaagatctgcttgaactt
gcagacatttcacgtactggtcagaccgtattgtatgatggacgtacaggtgagcgtttc
gaccgtcctgtaactgtcggttatatgtacatgctgaaactgaaccacctggttgatgac
aagatgcatgcgcgttctacaggttcttattcacttgttacacaacagccactgggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaagtctgggcacttgaagcatac
ggtgcagcttatacactgcaggaaatgctgactgtgaagtcggatgacgttgaaggtcgt
acccgcatctataagaacattgtagatggtaaccattatatggatccgggcatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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