KEGG   Achromobacter sp. AONIH1: C2U31_23845
Entry
C2U31_23845       CDS       T05288                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
achr  Achromobacter sp. AONIH1
Pathway
achr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:achr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C2U31_23845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:achr03400]
    C2U31_23845
DNA repair and recombination proteins [BR:achr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C2U31_23845
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C2U31_23845
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 Kinesin AAA_22 DUF87 Microtub_bd
Other DBs
NCBI-ProteinID: AUT50272
UniProt: A0A2I8DSZ8
Position
complement(5207672..5209654)
AA seq 660 aa
MYQPYPPAGDQPTAIDSLVQGMEDGLMYQTLLGVTGSGKTYTMANVIARLGRPALVLAPN
KTLAAQLYAEMREFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSA
TKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRSGDRISRREILARLVAMQYTRNDA
EFTRGVFRVRGETIDIFPAESAELALRLTLFDDEIESLELFDPLTGRIRQKLPRFTVYPG
SHYVTPRDTVLRAIETIKEELRERVKRYVDDGHLVEAQRLEQRTRFDLEMLQELGFCKGI
ENYSRHLSGAAPGEPPPTLIDYLPSDALMFIDESHVTIGQLSAMYRGDRSRKETLVQYGF
RLPSALDNRPLKLEEFEARMRQCVFVSATPAAYEREHTDNVVEQVVRPTGLVDPEVQVLP
ARTQVDDLLGQIKARVAVSERVLVTTLTKRMAEDLTDFLSEHGIRVRYLHSDIDTVERVE
IIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNLN
GHAILYADRITDSMQRAMQETERRRVKQLQFNADHGITARGVSKAVRELIDGIVAPVQHD
ALEAAVPAEFLNDEKALAREIKRLEKLMMDHARNLEFEQAAAARDALTALKQRVLLDGAV
NT seq 1983 nt   +upstreamnt  +downstreamnt
ctgtaccagccgtatccgccggcgggcgaccagccgacggccatcgacagcctggtccag
ggcatggaagacggcctgatgtaccagacgctgctgggtgtcaccgggtcgggcaagacc
tacaccatggccaacgtgatcgcccgtctcggccgtccggccctggtgttggcgcccaac
aagacgctggctgcgcagttgtacgccgaaatgcgcgaattcttcccgaagaacgcggtc
gagtacttcgtctcgtactatgactattaccagcccgaggcctacgtgccgacgcgcgat
ctgttcatcgagaaggactcgtccatcaacgagcacatcgagcagatgcggctgtcggcc
accaagagcctgctggagcgccgcgacactgtgatcgtgggcacggtgtcctgcatctac
ggtatcggcaatcccggcgactaccacgccatggtgctgatcctgcgctcgggcgaccgg
atttccaggcgcgagatcctggcgcggctggtcgccatgcagtacacccgcaatgacgcc
gagttcacgcgcggcgtgttccgcgtgcgtggcgagacgatcgacatctttccggccgaa
agcgccgagctggcgctgcggttgacactgttcgacgacgagatcgagagcctggagctg
ttcgacccgctgaccggccgcatccgccagaagctgccccgcttcacggtgtacccgggt
tcgcactacgtaacgccgcgcgataccgtcctgcgcgccatcgagacgatcaaggaagag
ctgcgcgagcgcgtcaaacgctatgtcgacgacggccatctggtcgaggcgcagcggctg
gagcagcgcacccgcttcgatctggaaatgctgcaggagctgggcttctgcaagggcatc
gaaaactattcgcggcatctatcgggcgccgcgccaggcgagccgccgcccacattgatc
gactatctgcccagcgatgcgctgatgttcatcgatgaaagccacgtcaccatcgggcag
ttgagcgccatgtatcgcggcgaccggtcgcgcaaggaaacgctggtccaatatggattc
cgcctgccttcggcgctggataacaggccgctgaagctggaggaatttgaagcgcgcatg
cgccagtgcgtgttcgtgtccgccacgccggctgcctatgagcgcgagcatacggacaac
gtggtggagcaggtggtgcgtcccacgggtctggtggatccggaggtgcaggtgctgcca
gcgcgcacccaggtcgacgacctgctgggccagatcaaggccagggtggcggtgtcggag
cgcgtgctggtgaccacgctcaccaagcgcatggccgaggatctgaccgacttcctgagc
gagcacggcatccgcgtgcgttatctgcattccgatatcgataccgtcgaacgcgtggaa
atcatccgcgacctgcggttgggcacgttcgacgtgctggtcgggatcaacctgctgcgc
gagggcctggacattcccgaggtttcgctcgtggcgatcctggatgccgacaaggaaggc
ttcctgcgctcggatcgcagcctgatccagaccatcgggcgcgccgcgcgcaacctcaac
gggcacgcgatcctttatgccgaccgcatcacggattcgatgcagcgggccatgcaggaa
acggagcggcggcgtgtcaagcagctgcagttcaacgcggaccacggcatcacggcgcgt
ggcgtcagcaaggcggtgcgcgagctgatcgacggcatcgtggcgccggtccagcacgat
gcgctggaagcggcggttcccgcggaattcctgaacgacgaaaaggcgctggcgcgcgag
atcaagcgcctggaaaagctgatgatggaccacgcccggaatctggagttcgaacaggct
gccgctgcccgcgatgccctgacggcattgaagcagcgcgtcctgctggacggcgcggtg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system