KEGG   Acidiferrobacter sp. SPIII_3: C4901_08365
Entry
C4901_08365       CDS       T05469                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
acii  Acidiferrobacter sp. SPIII_3
Brite
KEGG Orthology (KO) [BR:acii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acii03009]
    C4901_08365
Enzymes [BR:acii01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     C4901_08365
Ribosome biogenesis [BR:acii03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C4901_08365
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF2647
Other DBs
NCBI-ProteinID: AWP24969
UniProt: A0A2Z3R469
Position
1683608..1684525
AA seq 305 aa
MTDEFRFCLEISPAEEGLRLDRALARRLPQYSRTTLQGWLRDGRITIGARPVSAAAPVHA
GECVAFDLPPPAPADVLAEDIPLAIVFEDDTLIVIDKPAGLIVHPGAGCARGTLQNALLH
HAPDLAPLARSGIVHRLDKDTSGLLVVARTEAARLALIGQLKTREMGREYEALVIGAPPA
TGFVDAPIGRDVRHRTRMSVRRDGRPARSDFMVLERLGAYSLLRVRLHSGRTHQIRVHMA
YLGFPLVGDETYGGGRTRHLLDRQALHARRLSVRHPRTGESLVFEAPRPDDLANIVTMLR
HGSPS
NT seq 918 nt   +upstreamnt  +downstreamnt
ttgacagacgagttcaggttttgcctggagatatcgccggccgaggagggcttgaggctg
gatcgcgcgctggcgcgacggctgccgcagtactcgcgcaccacgctccagggttggctg
cgtgacgggcgtatcaccataggcgcgcggccggtgagtgcggcggcgccggtgcacgcc
ggcgaatgcgtggccttcgatctgccgccgccggcgcccgcggatgtcctggccgaggac
atcccgcttgcgatcgtgttcgaggacgacaccctgatcgtgatcgacaaacccgcgggg
ctcatcgtgcatcccggggccggctgcgcccggggtaccttgcaaaacgcgctcttgcat
cacgcgccggacttggcgccgcttgcgcgctcggggatcgtgcatcgcctcgacaaggac
acctccggcctgctcgtggtggcgcgcaccgaggccgcgcggcttgcactcatcgggcaa
ctgaagacccgcgagatgggacgcgaatacgaggcgctcgtgatcggcgcgccaccggcg
acgggattcgtggacgcgccgataggacgcgacgtgcgccaccggacgcgcatgagcgtg
cgccgcgatgggcgcccggcgcgttcggatttcatggtgctggagcgcctcggcgcctac
agcctgctgcgcgtacggcttcattccgggcgtacgcatcagatccgtgtccatatggca
tacctcggattcccgctcgtgggcgacgagacctatggcggggggcgcacgcgtcacctc
ctggaccgtcaggcgctgcacgcgcgccgcctttcggtgcgccatccgcgcaccggtgag
tcgctggtcttcgaggccccgcgtccggacgatctcgcgaatatcgtgaccatgctgcgc
cacgggagtccgtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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