KEGG   Acidipropionibacterium virtanenii: JS278_00006
Entry
JS278_00006       CDS       T05538                                 
Symbol
recF_1
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
acij  Acidipropionibacterium virtanenii
Pathway
acij03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JS278_00006 (recF_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acij03400]
    JS278_00006 (recF_1)
DNA repair and recombination proteins [BR:acij03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     JS278_00006 (recF_1)
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_23 AAA_21 AAA_29
Other DBs
NCBI-ProteinID: AXE37205
UniProt: A0A344UPK7
Position
7667..8869
AA seq 400 aa
MFVEHLSLTDFRSYVRAEVPMSPGVNTFVGSNGQGKTNLVEAVEYLSSLSSHRVNQDAPL
IRMGADQAVIRGRVRAGTDDARALLLELEINSHRANRARINRAPMPRTRDLLGVLRCVVF
SPNDLAIVRGDPADRRTFLDGLVITRWPRMAGVKADYERVLRQRNALLKSLSGRGATAGE
EIGATLEIWDDQLATIGAELLSARLDTLTAVMPLASGAYREIAPVNDIATADYRASIDLS
DLWEPTSQEPASPDDAGRPGVDRSRLHERFLDALAARRRDELVRGVTLVGPHRDDIVLSV
GEMPAKGYASHGESWSLALALRLASFQLLRADGVEPVLVLDDVFSELDSTRRDRLAVSVI
EADQVLVTAAVGTDVPDRLAGRRFHVGGGDVRPVQEDGDD
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtttgtcgagcatctttccctgaccgatttccggtcctatgtgcgcgccgaggtgccg
atgagccccggcgtgaacaccttcgtgggctccaacggccagggcaagaccaacctcgtc
gaggccgtcgagtacctctccagcctctcctcccaccgcgtcaaccaggacgcaccgctg
atccggatgggtgccgaccaggccgtcatccggggtcgcgtgcgcgccgggaccgacgac
gcccgtgccctcctgctcgaactcgagatcaactcgcaccgcgccaaccgggcccgcatc
aaccgcgccccgatgccgcgcacccgcgatctcctcggagtgctgcgctgcgtcgtcttc
tcccccaacgacctcgccatcgtccgcggcgacccggctgaccgccgcaccttcctcgac
ggcctggtgatcacccgctggccccggatggccggcgtcaaggcggactacgaacgggtc
ctgcgccagcgcaacgccctgctgaaatccttgtcaggacgcggcgccacggccggcgag
gagatcggcgccaccctggagatctgggacgaccagctcgccaccatcggggccgaactc
ctctcggcccgcctcgacacccttaccgccgtcatgccgctcgcctccggcgcctaccgc
gagatcgccccggtcaacgacatcgccaccgccgactaccgcgccagcatcgacctgtcg
gacctctgggaacccacctcccaggaacccgcctcccctgatgacgccggccgtcccggc
gtcgaccggtcccggctccacgagaggttcctcgacgctctggccgccagacgccgcgac
gagctggtccgcggagtcaccctggtcggcccccaccgcgacgacatcgtgctgtcggtc
ggcgagatgcccgccaagggatacgcctcccacggcgagtcctggtcgctggccctggcc
ctgcgtctcgcctccttccagctgctgcgcgccgacggcgtcgaaccggtcctggtgctc
gacgacgtcttctccgaactcgactccacccggcgggaccgccttgcggtatcggtcatc
gaggccgaccaggtgctcgtcaccgccgccgtcggcaccgacgtccccgaccgcctggcc
ggacgccggttccacgtcggcggaggggacgtccgtcccgtgcaggaggacggcgatgac
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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