KEGG   Acidipropionibacterium virtanenii: JS278_01473
Entry
JS278_01473       CDS       T05538                                 
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
acij  Acidipropionibacterium virtanenii
Pathway
acij03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JS278_01473 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acij03400]
    JS278_01473 (recD)
Enzymes [BR:acij01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     JS278_01473 (recD)
DNA repair and recombination proteins [BR:acij03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JS278_01473 (recD)
SSDB
Motif
Pfam: AAA_30 AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 AAA_22 SH3_13 UvrD-helicase Helicase_RecD PhoH SLFN-g3_helicase AAA_25 UvrD_C AAA Zeta_toxin nSTAND3 Herpes_Helicase AAA_16
Other DBs
NCBI-ProteinID: AXE38640
UniProt: A0A344UTP2
Position
complement(1600674..1602536)
AA seq 620 aa
MPDLIPVAAGVLVPFCRAGVLEAADVHLARLVCRAGGESSPDVELAAALTVRELRLGSVQ
MDPATIREQVTQQILDPAVMASAGPAELAAATEFGELEWPDPDRWLAELDASPAVAGPMT
PPNRRALRLDDGLLHPERYWQDEQQVAALTAALAEDPPAGLDGSAVEAAVRAVDLALAET
GTVLDPAQIRASEQACRRRLSILAGGPGTGKTTTVCAILAVLRRALGDPGPVRLAAPSGK
AAARLRDAVAEVSVGLPAAIRPPAVEATTVHSLLGSRGPGRGFSHGRHDPLAAGVVIVDE
ASMLSLPMAARLLEAIGPSTRLVLVGDPGQLVSVDAGSVLTDVVASAADLGPDRLPVTTL
TSNHRSGGAIARLAEAVRRGDHEAALDVLEAEDPSVRFVGVDAATVALESLPGVAGQVRS
VASRMVEAVDLSDDVTALGLVDEHRLLCAHRQGPYGVEAWSRQLDAALSDVLPGLGRGRW
VLGEPVIVNRNMRQLEINNGDCGVVVSQDPVPTVVLPSGSGAARRLPCALVASLRPLQAM
TVHKAQGSQFNRVTVVLPPPESPLLTRELIYTAITRARAGLMVVGSRESVVRAVAQPSLR
RSGLGRIWNLRTQRGGQIGP
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgcctgatctgatcccggtggccgcgggcgtcctggtcccgttctgccgggccggggtg
ctggaggccgccgacgtccacctggccaggcttgtctgccgggccggcggggaatcctcc
cccgatgtcgagctggccgcggccctgacggtccgggagctgcgcctgggatcggtccag
atggatcccgcgaccatccgcgaacaggtcacccagcagatcctcgacccggccgtgatg
gccagcgccgggcccgccgaactcgcggccgccaccgagttcggcgaactggaatggccc
gatcccgatcggtggctcgccgagctggacgccagcccggcggtcgcgggcccgatgaca
ccgcccaaccggcgcgccctgagactcgatgacggcctgctgcaccctgagcggtactgg
caggacgagcagcaggtcgccgccctgacggccgcgctggccgaggatccgcccgcgggt
ctcgacggcagcgccgtcgaggcagcggtgagggcggtggatctggccctggccgagacg
gggacggtcctggatccggcccagatccgggcttcggaacaggcctgcagacgtcgcctc
agcatcctggccggaggcccaggaacgggtaagacgaccaccgtctgcgcgatcctggcg
gttctgcgacgtgccctgggggatccggggccggtccgcctggccgcccccagcggcaag
gcggcggcccggcttcgcgacgctgtcgccgaggtctccgtcggtctgcccgcggccatc
cgtccaccggcggtcgaggccaccactgtccactcgctgctcgggtccagagggccgggc
cgggggttcagccacggacgccacgatcccctggccgccggtgtggtgatcgtcgacgag
gcgtcgatgctgtccctgccgatggccgcccggctgctcgaggcgatcggcccgtcgacg
aggctggtactggtcggcgatccgggccagctggtatcggtcgacgccggcagcgtcctg
accgatgtcgtggcctcggcggccgatctgggcccggatcggctcccggtcaccaccctc
accagcaatcaccgctccggcggggcgatcgcccggctcgccgaggcggtgcgtcgcggc
gaccatgaggcggcgctggacgtgctggaggccgaggatccgtcggtgcggttcgtcggc
gtcgacgcggccaccgtcgcgctggagagcctgccaggggtggctggtcaggtgcgctcc
gtcgcctccaggatggtggaggcggtcgacctgtccgacgacgtcaccgcgctggggttg
gttgacgagcaccggttgctgtgcgcccaccgccaggggccctacggcgtggaggcctgg
tcccggcagctggacgcggccctgtcggatgtgctgcccggtctgggccggggccggtgg
gtgctcggagagccggtgatcgtcaaccggaacatgcgccagctcgagatcaacaacggg
gactgcggtgtcgtggtctcccaggacccggtgcccacggtggtgctgcccagtggttcc
ggggcggcgcgccggctgccctgcgccctggtggcgtcgctgcgccccctccaggcgatg
actgtccacaaggcgcagggatcccagttcaaccgggtgacggtggtgctcccgcctccc
gagtcgccgctgctcacccgtgaactgatctacaccgccatcacccgcgcccgcgcgggc
ctcatggtggtcggatcccgggaatcggtggtcagagcggtcgcccagccgtcgctgcgc
cgctcagggctgggacggatctggaatctccggacccagcggggtggacagatcggcccc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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