KEGG   Arthrobacter citreus: HPK19_22100
Entry
HPK19_22100       CDS       T06606                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
acit  Arthrobacter citreus
Brite
KEGG Orthology (KO) [BR:acit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:acit03016]
    HPK19_22100 (thpR)
Enzymes [BR:acit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     HPK19_22100 (thpR)
Transfer RNA biogenesis [BR:acit03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    HPK19_22100 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL
Other DBs
NCBI-ProteinID: QKE75230
Position
4643010..4643561
AA seq 183 aa
MSEHYFLAVPLPLQIKEKLDDFSQKWVGKLPFKKWTFKDDFHITLSFLGPVTYTKSVELM
DQLKEELDDFKSFNLTVQHLGIFGNDAKPRVWWFGLENSIELINLQHRISNICEKIGFSV
EKRSYNPHITIAKKYNDIFDKEFKVPFTWEEDPLKFEADEIILYKIQPSKKPSYQSVASI
KLK
NT seq 552 nt   +upstreamnt  +downstreamnt
ttgagtgaacattattttcttgctgttcctttgccattacaaattaaagaaaaattagat
gatttttcacaaaagtgggtcggaaaattaccatttaaaaaatggacttttaaagatgat
tttcatattactttatcatttttaggcccagttacatataccaaaagtgtagaactaatg
gatcaattaaaagaagagcttgatgatttcaaaagcttcaacttgaccgtccaacattta
gggatatttgggaatgatgcaaagccacgtgtatggtggtttggtcttgaaaatagcatt
gaattaatcaatctacaacatagaataagtaatatatgtgaaaaaattggattttcagtt
gaaaaacgttcttataatccgcatattacaatcgcaaaaaaatataatgatatattcgat
aaagaatttaaggtcccatttacctgggaggaagacccactaaaatttgaagcggatgaa
atcattttatataagattcaaccttctaagaaaccaagttatcaaagtgtagcgtcaatt
aagttgaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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