KEGG T04083: AM609

Actinomyces sp. oral taxon 414: AM609_07250

Entry

AM609_07250       CDS       T04083

Name

(GenBank) 3'-5' exonuclease

K03684

ribonuclease D [EC:3.1.13.5]

Organism

acq Actinomyces sp. oral taxon 414

Brite

KEGG Orthology (KO) [BR:acq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:acq03016]
    AM609_07250
Enzymes [BR:acq01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AM609_07250
Transfer RNA biogenesis [BR:acq03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AM609_07250

SSDB

Motif

Pfam:

DNA_pol_A_exo1 DNA_pol_A_exoN HRDC

Other DBs

NCBI-ProteinID:

ALD00632

UniProt:

A0A0M5JSA9

Position

1774909..1776066

AA seq 385 aa
MEAAVGALAAGSGPVAVDAERASGFRYGQDAYLVQLRREGAGTFLVDPVGAGPLEALGGA
LDGPEWILHAADQDLPCLAALGLAPRSLFDTELAARLLGRRHVGLGAVLEETLGLRLAKD
HAAADWSTRPLPETWLVYAALDVELLIELRAALADELAAAGKADWAAQEFEYERTRPPRP
AKTDPWRRIPRAGRAVRSPRSLAVLRELWTTREELARELDLCPSKVLSHGALVAAALARP
TSRRKMESLREFSSRQARAHRELWWRAIERALELPEEELPPVHPPLAPGELPQPRSWSRR
HPEAATALEEVRGAVRTRAEHIRVPQELLVSPDVQRRLAWAVGEEEADGGAPDVSVRALA
TRMTGLGARPWQVEQAAPALSDALA

NT seq 1158 nt +upstreamnt +downstreamnt
ctggaggccgccgtcggggcgctggccgccgggagcgggcccgtggccgtcgacgccgag
cgcgcctcggggttccgctacgggcaggacgcctacctcgtgcagctgcgccgcgagggc
gcggggaccttcctcgtcgacccggtcggcgccggcccgctggaggcgctggggggcgcg
ctggacggcccggagtggatcctgcacgccgccgaccaggacctgccgtgcctggcggcc
ctcgggctcgcgccccgcagcctgttcgacaccgagctggccgcccgtctcctgggccgc
cggcacgtggggctcggggcggtgctcgaggagaccctcgggctgcgcctggccaaggac
cacgcggccgccgactggtcgacccgccctctgccggagacctggctggtgtacgcggcc
ctcgacgtcgagctcctcatcgagctgcgcgccgctctggccgacgagctcgccgcggcc
ggcaaggccgactgggcggcccaggagttcgagtacgagcggacccgccccccgcgcccg
gccaagaccgacccgtggcgccggatcccgcgcgccggacgggccgtgcgctcccccagg
tcgctggccgtactgcgcgagctgtggacgacccgcgaggagctggcccgggagctggac
ctgtgcccctccaaggtcctgtcccacggcgccctggtcgccgcggccctggcccgcccg
acctcgcggcgcaagatggagtccctgcgcgaattctcctcccgccaggcccgcgcccac
cgcgagctgtggtggcgggcgatcgagcgggccctggagctgcccgaggaggagctcccg
cccgtccacccgcccctggcgccgggcgagttgccccagccgcgctcgtggtcccgccgc
catcccgaggcggccacggccctggaggaggtgcgtggcgccgtgcgcacccgcgccgag
cacatccgggtgccgcaggagctgctggtctcccccgacgtccagcgccgcctggcctgg
gccgtgggcgaggaggaggccgacggcggcgcgccggacgtgtccgtcagggctctggcg
acccgcatgaccgggctcggcgcccgcccctggcaggtggagcaggcggccccggccctg
tccgacgccctggcctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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