KEGG   Anolis carolinensis (green anole): 100558181
Entry
100558181         CDS       T01608                                 
Symbol
ptcd1
Name
(RefSeq) pentatricopeptide repeat domain 1
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
acs  Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:acs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:acs03016]
    100558181 (ptcd1)
   03029 Mitochondrial biogenesis [BR:acs03029]
    100558181 (ptcd1)
Transfer RNA biogenesis [BR:acs03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    100558181 (ptcd1)
Mitochondrial biogenesis [BR:acs03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    100558181 (ptcd1)
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR PPR_1
Other DBs
NCBI-GeneID: 100558181
NCBI-ProteinID: XP_003228851
UniProt: H9GJE9
Position
Un
AA seq 708 aa
MAVQLVSRHFLEVFCPWISTHSRFSSISKNCLLLRFLGLRTFSSSPALYKLHNRDLGKEL
PSSSSEAILKQEPDDDDDEVGFGTLSHKFSGRRFFQKATPELYNLQLQAQGEEENEPRPK
PRHGPRNTPYWYFLQCKALIKENKLKEALDLFETQMLKEERVFPEESNYTVLIGGCGRVG
YLKKAFRLYNDMKKRGLEPTDATYTALFNACAESPWKDTGLQAALKLRQELLSKNIELSV
ITYRALLKACAFCSDLQMCFEILKEMVHKGHQITTETFNFLLMGCIKDKENGFRYALQVW
QQMRKLNLKPDSYSYNLMLNAARECGLGDPAAASELLLRPSGEGSAIPRLEAGGRKKRKG
QRGKTADPGLGTQLDVEKLEKSIFPEESREVEEQNSAASNACIKAEARGASNPTDMITFK
EPMSYENSCLSSSMTEVGAMDTCHLPNLLDLQIENKNVVSLGTVATASDRLALMGNLEGF
LQKMKSDGVEPNIKTYTLLAEVVQPGSPAEASLLAAMEKEDNVKADITFFNTLIRKKSKA
ADLEGAKSLMPILRKKGLSPNLQTFCNLAIACRKQKDGLQLLSDMQQSGQNPNVHIYSTL
INAAVKRLDYAYLIEILKDMRNTRVPPNEVVIRQLEFAAQYPPQFDRYKTKDPYLERIDG
FRAYYFRWLKWMEAEETPHPWAKFRNPKQPEKKDDSDDAQKHRGEMGQ
NT seq 2127 nt   +upstreamnt  +downstreamnt
atggctgtgcaactggtatcccgtcacttcttagaagttttctgtccttggatatctact
cattccagattctcttccatttcaaagaactgtttactactcaggtttctgggcctaaga
actttcagctcctctccagcactttacaagttacacaacagggacttgggaaaggaactg
ccttccagctcctctgaagccattcttaagcaggagcctgatgatgatgatgatgaagtc
ggctttgggacactgtcccataaattctctggaaggcggtttttccagaaagcaacacca
gaactctacaacttacagctccaagcgcagggagaggaggagaatgagccgcgaccgaaa
ccccgccatggtcccaggaatactccgtattggtatttcttgcaatgcaaggccctgata
aaggagaataagttgaaagaagccctggatctgtttgagacacagatgctgaaggaagag
cgcgtcttcccagaagagagcaactacacagtgttgatcggcggatgtggcagagttgga
tatctgaagaaagccttcaggctctacaatgatatgaaaaagcgaggcttggagcccacc
gatgccacgtacactgccctgttcaatgcctgtgcggagtcgccctggaaggataccggc
ctgcaagcggctctgaagttacggcaggaactgctgagcaaaaacattgagctgagtgtc
atcacctaccgtgccctcttgaaagcttgcgccttctgctcagatctccagatgtgcttc
gagatcctgaaggagatggtccataaaggccaccagattaccacagagacattcaatttc
ctcctcatgggatgcatcaaagacaaagaaaatgggttccggtatgccttgcaggtctgg
cagcagatgagaaaactgaatcttaaacccgacagctacagctacaacttgatgctcaac
gctgccagagagtgcggccttggggatcccgcagcggcttcggaattgttgctcagacct
tcgggcgaaggctctgccattccacggctggaggccggtgggaggaaaaagagaaaaggc
cagagaggaaaaacagcagaccctggacttggtacacaattggatgtagaaaaactggaa
aaatccatcttcccagaagagagcagggaggtggaggagcaaaacagtgctgcaagcaat
gcttgcatcaaggcagaggccagaggcgcttcaaatccaacagatatgataacgttcaag
gaaccaatgtcatatgaaaatagctgtttgtcttcaagcatgacagaagtaggtgctatg
gatacatgccaccttcccaacctactagacttgcagatagaaaataaaaatgtggtttcc
ttgggaactgtggccacggcttccgacaggctagctttgatggggaacctggagggcttc
ttgcagaaaatgaagagcgatggagtggagcccaacatcaagacgtacacgctgctggcc
gaagtggtccagcccggcagcccagcggaagcttccttactggcagcgatggagaaggag
gacaatgtgaaagctgacataactttttttaacaccttgatcaggaagaagagtaaagca
gcagatctggaaggagcaaagagcttaatgccaatactgcggaagaaaggactctcgccc
aatttgcagaccttttgtaacttggccatagcctgccgcaagcagaaggatggactgcag
ctactttcagatatgcagcaatctggccaaaaccccaatgtacacatctacagtactctg
attaatgccgccgtgaagagactggactatgcctacctgatagagatcctaaaagatatg
agaaacactcgagtccctccaaatgaagtggtcatacgtcagctggagttcgcagcccag
tatccgcctcaatttgatcggtataaaacaaaggacccttatctggagagaattgatggc
tttcgagcctactacttccgctggctaaagtggatggaagcagaagaaactccgcaccct
tgggcaaaattcagaaatccgaagcagccggaaaagaaagacgattctgacgatgcccaa
aagcacaggggtgaaatgggacagtag

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