KEGG   Anolis carolinensis (green anole): 100560093
Entry
100560093         CDS       T01608                                 
Symbol
nelfb, cobra1
Name
(RefSeq) negative elongation factor complex member B
  KO
K15180  negative elongation factor B
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100560093 (nelfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acs03021]
    100560093 (nelfb)
Transcription machinery [BR:acs03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     100560093 (nelfb)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 100560093
NCBI-ProteinID: XP_003228391
Ensembl: ENSACAG00000012467
UniProt: H9GIZ5
Position
Un
AA seq 577 aa
MFAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELREKLLERISAIASEGKAEERYKKLEDLLEKSFPLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKETALFSCD
LSVLHNFFSPSPKTRRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRHLQELVGQDMLPRESPDLLLLLRMLSLGQGAWDMIDSQIF
KEPKMEVDLITKFLPLLMSFVVDDYTFTVDQRLPSEEKGPAPYPTAIPEMFPKFLQEHRI
ACEIGLYYVLHITKLRNKNAFLRLLPSLVETFNDLAFGDIFLHLLTGNLTLLADEFGQEE
FCTSLFDNVFLPACSRKENVHRHMLRLLLHLHHKVVPAKLESLQKSLEPTKQSGEAVKEL
YNQLNEKLELRKPSPAHAAEAPSMDLSLPTVPTPASL
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgttcgccggcttgcaggagctcggggtggccaacggggaagacctgaaagagacgctg
accaactgcacggagccgctgaaggccatcgagcagttccagaccgagaacggcatcctg
ctgcccaccctccagtcagcgctgcctttcctggacctccatggcaccccgaggctggag
ttccaccagtccgtcttcgacgagctgcgagagaagcttctggagaggatctccgccatc
gcctcagaaggaaaggcagaagaaaggtacaaaaagctggaagatctgctggagaagagt
ttccctttagtcaagatgccttccatccagccggtggtcatgtgtgtcatgaaacacctc
cccaaggttcctgaaaaaaagctgaagttggtaatggccgacaaagacctgtacaaagcc
tgcgctgtggaggtgaagcgtcagatctggcaagataaccaggctctttttggcgacgaa
gtctccccgctgctgaagcagtacatcctggagaaggagactgctctgttcagctgcgac
ctctccgtcctgcataatttcttcagtccctcacccaagacccggcgccagggagaggtg
gttcaaaagctcacgcagatgattgggaagaacgtgaagctttacgacatggtgctccag
ttcctgaggaccctcttcctgcggacgcgcaatgtccattactgcacgctgcgggctgag
ctgctgatgtcgctgcacgacctggagatcagcgagatctgcacggtggacccctgccac
aagttcacctggtgcctggatgcctgcattcgggagaagtttgttgacaacaagcgcgcg
cgagagctgcaaggtttcctcgacggagtgaagaaagggcaagagcaagtgctgggggac
ttatccatgatcttgtgcgacccattcgccatcaataccttggcgctgagcaccatccgc
cacttgcaggagctggtggggcaggacatgttgcccagggaaagccccgaccttttactt
ctcttgaggatgttgtcgctgggacagggagcctgggacatgattgacagccagatcttc
aaggaacccaaaatggaggtggacttgatcaccaagttcttgcccttgctgatgtccttt
gtggtggatgattacaccttcactgttgatcagaggctgccttcagaagagaaaggcccg
gcaccttaccccaccgccatcccagaaatgtttccaaaatttctgcaggagcaccgcatt
gcctgcgagattggcctttactatgtgctccatatcactaagctgaggaacaagaacgct
tttcttcggctgctcccttctctggtggagactttcaatgacctggcctttggagacatt
ttcctgcacttgctcaccgggaacctcactctcctggctgacgaattcgggcaagaggag
ttctgcaccagcctctttgacaacgtcttcctccccgcctgttcaaggaaagagaatgtg
cacaggcacatgctgaggctgctgcttcacctccaccacaaagtggtccctgccaagctg
gagtccctgcagaaatctctcgagcccaccaagcagagcggtgaagccgtgaaggagctg
tacaaccagctgaatgagaaactggagctccgaaagcccagcccggcccacgcagctgag
gctccttccatggacttgtccttgcccacagtccccactccggcctcgctttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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