KEGG   Aspergillus clavatus: ACLA_012210
Entry
ACLA_012210       CDS       T01148                                 
Name
(RefSeq) RNA binding protein, putative
  KO
K12881  THO complex subunit 4
Organism
act  Aspergillus clavatus
Pathway
act03013  Nucleocytoplasmic transport
act03015  mRNA surveillance pathway
act03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACLA_012210
  09122 Translation
   03013 Nucleocytoplasmic transport
    ACLA_012210
   03015 mRNA surveillance pathway
    ACLA_012210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_012210
   03041 Spliceosome [BR:act03041]
    ACLA_012210
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     ACLA_012210
    TREX complex
     ACLA_012210
Spliceosome [BR:act03041]
 Complex C
  Other components
   EJC/TREX
    ACLA_012210
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    ACLA_012210
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 4706488
NCBI-ProteinID: XP_001274219
UniProt: A1CAM5
AA seq 332 aa
MDRSLDEIIAERPNQNQNQNRGRRPQGQGQGRRRDGVKKSYKEERVDLDLDWVHDRYEDD
RDTRPARAPRRPRGDRYSPAGEHSATGSKIRVENLHYDITESDLEDLFTRIGPITNLSLV
YDRAGRSEGVAYVTYNRVSDARTAISEFDGANAKGQPIRLALVAAGSGGGRRDRNPFDNV
ERPKGSLFDRVERPRNARSLSPGSDHGDADDGARRRRGRRGGAGGRRSDVSKPAPDHIDR
YVPGQRSPVRRSANGRRQGERRDDRGRGEGRRNPNARPKKTQEELDQEMDDYWGGANAGA
GTADKEAVQDEPQQIAPATSAAAGDDDVDMIE
NT seq 999 nt   +upstreamnt  +downstreamnt
atggaccgcagcctggacgagatcatcgctgagcgacctaatcagaatcaaaaccagaac
cgaggccgtcgccctcagggccaaggccaaggccgtcgccgtgatggcgtgaaaaagtcc
tacaaagaagaacgagtcgatttagatcttgattgggtccatgacagatatgaagacgac
agagacacacgccctgcccgtgcccctcgacgtcctcgcggcgatcgctactcccccgcc
ggtgaacactccgcgaccggttcgaagattcgcgttgaaaaccttcattacgatatcaca
gagagcgaccttgaggatctcttcacccgaattggacccattacgaacctctcccttgtt
tacgaccgggctggacgctcggaaggcgttgcctacgttacctacaaccgtgtgagcgat
gcgagaacggcgatatccgaatttgacggcgcaaacgccaagggacagcccatccgtttg
gccttggttgccgccggcagcggtggcggaagacgggatcgcaacccctttgacaacgtt
gaacggcccaagggaagtctctttgaccgagtggagcgcccacgcaatgcccgaagcctg
agccccggaagcgatcacggtgatgccgatgacggagcgcgccgtcgtcgtggccgtcgc
ggcggcgcaggcggccggcgcagcgacgtctcgaagccagctcccgaccatattgaccgg
tacgtgccgggccagcggtcgccagtacggcggagcgccaacggcagacgacagggggag
cgacgcgatgatcggggtcgaggcgagggtcgtcgcaaccccaacgccaggccgaagaag
acgcaggaggaacttgatcaggagatggatgactactggggcggtgcaaacgccggtgct
ggtactgcagacaaggaggctgtgcaggatgagcctcagcagattgctcccgcaacttct
gctgctgcgggtgatgacgatgtggatatgattgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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