KEGG   Aspergillus clavatus: ACLA_054010
Entry
ACLA_054010       CDS       T01148                                 
Name
(RefSeq) TFIIH and nucleotide excision repair factor 3 complexes subunit (Tfb2), putative
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
act  Aspergillus clavatus
Pathway
act03022  Basal transcription factors
act03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ACLA_054010
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACLA_054010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:act03021]
    ACLA_054010
   03400 DNA repair and recombination proteins [BR:act03400]
    ACLA_054010
Transcription machinery [BR:act03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     ACLA_054010
DNA repair and recombination proteins [BR:act03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     ACLA_054010
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 4706974
NCBI-ProteinID: XP_001274781
UniProt: A1C931
AA seq 478 aa
MAAAPSRPFDYLESLPGTVFIKLYQEPSTALAIFRRMLPDLAKCFVMALLYLKDPLPAAD
LETWVKPDSLKERDNALSTLGRLHILTNTMTADNVRAYMVTKEFASSLRQALTGAEHTQS
FGVVSNVSDEAAVSIADLDEYSRRQWEGVLGYMVGTGGLGMQRDVNLSKGVKQLLQAGHL
VEIRDRRVEITKDGFAFVLQDVGTQVWHILILYVESAEAIGMDSVEVLKFVFFLSSLELG
RSYEKKQMTSNQLRTLTDLADFGIVYQESPEATHFYPTRLATTLTSDSSALSNPIAGSLS
GPTGTASNKAGSGFIIIETNYRLYAYTSSPLQISLIALFTTLKYRFPNLITGKITRQSIR
RAVEMGITADQIISYLSTHAHPQMRKHNASRSTSNQAGMPVSVLPPTVVDQIRLWQLERD
RVKATPGFLFKDFVSLAEYEAPCRYAEEIGVLVWKSDRKRMFFVTRHEQVAAFLRSRK
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctgcggcaccatcccgtccgtttgattacctggagagcttgcctgggactgtgttc
atcaagctctatcaggagccatccactgctcttgcgatcttcaggcgcatgttgcctgac
ttggcaaaatgttttgtgatggcgcttctctacctcaaagatccgcttccagcagcggat
ctggaaacatgggtcaaaccggacagtctgaaggagcgtgataatgcgctgtccacgcta
ggccgactgcacattttgaccaacacaatgactgcggataacgtgcgagcgtacatggtc
accaaagagttcgcttcctcgctccgacaagctcttaccggcgccgagcatactcagtcg
tttggtgtggtgtccaatgtatccgatgaggcagcggtatcgatagccgatttagacgag
tactcgagacggcaatgggaaggggtcctaggatacatggtgggcacaggtggcttgggt
atgcaacgtgatgtcaatttgagcaagggcgtgaagcagcttttacaggccggccatctt
gtcgaaatcagggatcgtcgggtggaaatcaccaaggatggattcgcttttgtcctgcaa
gatgttggcacgcaagtgtggcatatcctcattctctatgttgagagtgcagaggccatc
ggcatggacagtgtcgaggttctcaaatttgtgttcttcctgagcagtcttgaacttggg
agatcctatgagaagaagcagatgacgtccaatcaactgcgcactctgaccgacctggcc
gactttggcattgtctaccaagaatcaccggaggccacacatttttatcccactcgtctc
gcgaccaccttgacctctgattccagtgctctgagcaatcccatcgccggttcactatct
gggcctacgggtacagcttcgaataaggcgggctctgggttcattatcatcgaaacgaat
taccgactgtacgcatacacctcctcgccgctccagatctctctcattgcactctttaca
accctgaaataccgcttccccaatttgatcacgggcaaaatcactcgccagtccatccgc
cgtgcagtcgagatgggtatcaccgctgatcagattatctcgtacctctcgacacatgca
cacccccagatgcgcaagcacaatgcatcccgatcgacttctaaccaagccgggatgccg
gtgtccgttctcccacccactgttgtcgaccagatccgcctctggcagctcgaaagagat
cgtgtcaaagcgacccctggattcttgttcaaggatttcgtcagtcttgcagaatacgag
gctccgtgtcggtatgccgaagaaatcggcgtcctggtttggaaatctgaccgcaaacga
atgttctttgtcacaaggcacgagcaagttgctgcattcttgagaagtagaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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