KEGG T05306: C1701

Actinoalloteichus sp. AHMU CJ021: C1701_15895

Entry

C1701_15895       CDS       T05306

Name

(GenBank) DNA-3-methyladenine glycosylase

K13529

AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

acta Actinoalloteichus sp. AHMU CJ021

Pathway

acta03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:acta00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C1701_15895
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:acta03000]
    C1701_15895
   03400 DNA repair and recombination proteins [BR:acta03400]
    C1701_15895
Enzymes [BR:acta01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     C1701_15895
Transcription factors [BR:acta03000]
Prokaryotic type
  Helix-turn-helix
   AraC family
    C1701_15895
DNA repair and recombination proteins [BR:acta03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C1701_15895

SSDB

Motif

Pfam:

AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD DUF6233

Other DBs

NCBI-ProteinID:

AUS79581

Position

complement(3665681..3667150)

AA seq 489 aa
MLLDRDRCVRAVRSRDARFDGWFYTAVLTTGIYCRPSCPVVPPKPENMSFHPSAASAQQA
GFRACKRCRPDASPGSPEWNERADLVARAMRLIADGVVDRDGVPGLAARLGYGPRQVERQ
LVAELGAGPLALARAQRAQTARLLIETSSLRMADVAFAAGFASVRSFNDTVQAVFGLTPT
DLRSRVRGGAPPRTPGTLAVRLPFRRPFTPDSLFGHLAVTAVPGVEEWRDGAFRRALRLP
HGPAVVALRPETDHIGCRLTLSDLRDLSAAINRCRWLLDLDADPVAVDELLTGDPALAPL
VHAGPGRRVPRAADGPEFAVRAVLGQQVSTAAARTHAGRLVAAHGEPLAAPDGGLTHLFP
EPGTLAGLDPDSLALPRTRRATLTTLVARLAAGDLDLGPGADWDRARAELRPLPGLGDWT
VETIAMRALGDPDAFVATDLGIRHATRALGLPHTPGALTRRAEAWRPWRAYAVQYLWSTT
SHLMNRLPA

NT seq 1470 nt +upstreamnt +downstreamnt
atgcttctcgaccgggaccggtgcgtgcgagcggtgcggtccagggacgcccgcttcgac
gggtggttctacacggcggtgctcaccaccggcatctactgccgacccagctgccccgtg
gtgccacccaaaccggagaacatgagcttccaccccagcgccgcctcggcgcagcaggcg
gggttccgggcgtgcaagcgatgccgcccggacgccagccccggctcacccgagtggaac
gaacgggcggacctggtggccagggcgatgcggctcatcgctgacggggtggtggaccgg
gacggcgttcccggcctggccgcccgcctcggctacggcccccgccaggtggagcggcaa
ctggtggccgagctcggcgcggggccgctggcgctggccagggcccagcgggcgcagacc
gcgcgtctgctgatcgagacgtccagcctgcggatggccgacgtcgccttcgccgccggc
ttcgccagcgtccgctcgttcaacgacaccgtccaggcggtcttcggcctcaccccgacc
gatctgcggtcgagggtgcgcggtggagcgccgccccgaaccccggggaccctggccgtg
cggttgccgttccgccggccgttcaccccggacagcctgttcggccacctcgcggtcacc
gcggtccccggtgtcgaggagtggcgcgacggcgcgttccgccgcgcgctgcgactcccc
cacggaccggccgtggtggccctgcgaccggagaccgaccacatcgggtgccggctcacc
ctctccgacctgcgcgacctgtccgccgcgatcaaccggtgccggtggctgctggacctc
gacgccgacccggtcgcggtcgacgagctgctcaccggcgatcccgccttggcgccgctg
gtccacgccggcccgggccggcgcgttccccgcgcggcggacgggccggagttcgccgtc
cgcgccgtcctcggccagcaggtctccacggcggccgcccgcacccacgccggccggctg
gtcgccgcccacggggaaccgctggccgcaccggacggtggcctcacccacctcttcccc
gaaccggggaccctggccggtctcgacccggacagcctcgccctgccccgcacccggcgg
gccaccctgaccaccctggtcgcccggctggcggcgggagacctcgacctcggcccaggg
gcggactgggaccgggcccgcgccgaactccggccgctgcccggcctgggggactggacg
gtggagacgatcgcgatgcgggcactcggcgacccggatgccttcgtcgccaccgacctg
gggatccggcacgcgaccagggcactggggctgccgcacacgcccggggcgctgacccgc
cgtgccgaggcgtggcggccctggcgcgcctacgccgtgcagtacctgtggtccaccacc
agccacctcatgaaccgcttacccgcctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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