KEGG   Actinomyces gaoshouyii: B6G06_02820
Entry
B6G06_02820       CDS       T04911                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
actp  Actinomyces gaoshouyii
Brite
KEGG Orthology (KO) [BR:actp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:actp03032]
    B6G06_02820
   03036 Chromosome and associated proteins [BR:actp03036]
    B6G06_02820
   03400 DNA repair and recombination proteins [BR:actp03400]
    B6G06_02820
DNA replication proteins [BR:actp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    B6G06_02820
Chromosome and associated proteins [BR:actp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    B6G06_02820
DNA repair and recombination proteins [BR:actp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      B6G06_02820
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-DNA_bdg DUF5321 Staph_opine_DH
Other DBs
NCBI-ProteinID: ARD41432
Position
710259..710543
AA seq 94 aa
MSVNRTELIAAIAAKTDLKKTDADAFLAAFQEVLVESVSKGEAVKITGLMGVERVKRAAR
TGRNPRTGEEIQIPAGYGVKLTVGSALKKAVADN
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtccgtcaaccgcaccgagctcatcgcagccatcgccgccaagaccgatctgaagaag
accgatgccgatgccttcctcgccgccttccaggaggttctcgttgagagtgtctcgaag
ggcgaggctgtcaagatcacgggcctgatgggtgtggagcgcgtcaagcgcgccgcccgc
actggccgtaacccccgcaccggcgaggagatccagatccccgcgggctacggcgtgaag
ctgacagtgggctcggccctcaagaaggctgtcgccgacaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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