KEGG   Actinoplanes sp. SE50: ACWT_0375
Entry
ACWT_0375         CDS       T05392                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
acts  Actinoplanes sp. SE50
Brite
KEGG Orthology (KO) [BR:acts00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acts03032]
    ACWT_0375
   03400 DNA repair and recombination proteins [BR:acts03400]
    ACWT_0375
Enzymes [BR:acts01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ACWT_0375
DNA replication proteins [BR:acts03032]
 Prokaryotic type
  DNA Topoisomerases
   ACWT_0375
DNA repair and recombination proteins [BR:acts03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ACWT_0375
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 Toprim_2 HC2
Other DBs
NCBI-ProteinID: ATO79790
Position
438194..440974
AA seq 926 aa
MPSDARTTRLVIVESPSKAKTIAGYLGPDYLVEASVGHIRDLPKNADEVPAKYKGQPWAR
LGVDVDNGFHALYVVSAGRREQVAKLQRLAKEVDEIFLATDEDREGEAIAWHLIETIKPK
VPVKRMVFHEITKPAIQAAVANPRDIDRSLVDAQEARRILDRLYGYEVSPVLWKKVMRGL
SAGRVQSVATRIVVERERQRMAFRSAEYWDIQALLAVQGPVDGPRNFSATLIALDGDRIA
SGKDFEPTTGQLKPGAAVVQLDGDGARGLAARLADRPFTVSRVEEKPYRRRPYAPFTTST
LQQEASRKLRSSSKQTMSTAQSLYEKGYITYMRTDSVNLSETAIAAARRQIAELYGANNV
PPQPRRYTTKSKNAQEAHEAIRPAGDNFRTPGEVAKELNTAEFKLYELIWRRTIASQMTD
AIGNSISVRIRAVSTANEEADFAASGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTADELNALGHHTSPPPRYTEASLVKMLEELGIGRPSTYTSIMQTIQDRGYVEKRG
QAMIPTFPAFAVVGLLENHYGRLVDYNFTAAMEGQLDDIASGDHTAVDFLTSFYFGSQAG
GADEEIAKAGGLKKMVTEDLSAIDAREVNSIPLFTDDQNRQVVVRVGKFGPYLQRSNTQV
ADGAEEASEDRASIPEGVAPDELTREKVEELFLAGNGDRTLGDNPATGEPVLVKSGRFGP
YVQSGESKSSLFQSQSPQTLTLEQALQLLSLPRVVGKDPEGNEIIARNGKFGPFIQRLKD
SRSLESEERLFTVTLDEALAMLAAPKVRGQRGAPKPPLRDLEGVDPVSEKPLLVKDGRFG
PYVTDGETNVTLRRGQTPEELTLQEAIEMIAEKRAKGPAPKKAPAKKAAPAKKAAAKAAT
PAKKATAKKAAPAKKAAPRKAAASSE
NT seq 2781 nt   +upstreamnt  +downstreamnt
gtgccgagtgacgccaggacgacccgtctggtcatcgtcgagtctccgtcgaaggccaag
acgatcgccggttatctggggcccgactatctggtcgaggcctccgtcgggcacatccgc
gatctgccgaagaacgccgacgaggtcccggccaagtacaagggccagccgtgggcccgg
ctcggcgtcgacgtcgacaacggcttccacgcgctgtacgtggtctccgccggccgtcgg
gagcaggtcgccaagctgcagcggctggccaaggaggtcgacgagatcttcctcgccacc
gatgaggaccgcgagggcgaggcgatcgcctggcacctgatcgaaacgatcaaacccaag
gtgccggtcaagcggatggtcttccacgagatcaccaagccggccatccaggcggccgtg
gccaacccgcgcgacatcgaccgttcgctggtcgacgcgcaggaggcccgccgcatcctg
gaccggctgtacggctacgaggtcagcccggtcctgtggaaaaaggtgatgcgcggcctg
tccgcgggtcgcgtgcagtcggtcgccacccggatcgtggtcgagcgtgagcggcagcgg
atggcgttccgctccgcggagtactgggacatccaggcgctgctggccgtgcagggtccg
gtcgacggcccgcgcaacttctccgccacgctgatcgcgctggacggcgaccggatcgcc
agcggcaaggacttcgagccgaccaccggacagctcaagccgggcgcggccgtggtccag
ctggacggtgacggcgcccgcgggctggccgcccggctggcggaccgcccgttcacggtc
agccgggtcgaggagaagccgtaccgccgccggccgtacgcgccgttcaccacctcgacg
ctgcagcaggaggcgtcccgcaagctgcggtcctcctcgaaacagacgatgagcaccgcg
cagagcctgtacgagaagggctacatcacctatatgcggacggactcggtgaacctctcc
gagaccgccatcgccgccgcccgccggcagatcgccgagctgtacggggcgaacaacgtg
ccgccgcagccccggcgctacaccaccaagtcgaagaacgcgcaggaggcgcacgaggcg
atccgtcccgccggggacaacttccgcaccccgggcgaggtggccaaggagctgaacacc
gccgagttcaagctctacgagctgatctggcggcggaccatcgcctcgcagatgaccgac
gcgatcggtaactcgatcagcgtccggatccgcgccgtctccaccgcgaacgaggaggcc
gacttcgccgcctccggcaagacgatcaccgacccgggcttcctgcgcgcctacgtcgag
tcgtccgacgacgagaacgccgaggccgaggacgccgagcgccgcctgccgaacctggtg
aaggaccagccgctgaccgccgacgagctgaacgcgctgggccaccacacctcaccgccg
ccgcggtataccgaggcctcgctggtcaagatgctggaggagctcggcatcggccgcccc
tccacgtacacctcgatcatgcagaccatccaggaccgcggctatgtggagaagcgcggc
caggcgatgatcccgaccttcccggccttcgccgtggtcggcctgctggagaaccactac
ggccggctggtcgactacaacttcaccgccgccatggaggggcagctcgacgacatcgcg
tccggtgaccacaccgccgtcgacttcctcacctctttctacttcggcagccaggccggc
ggggcggacgaggagatcgccaaggccggcggtctgaagaagatggtgaccgaggatctg
agcgccatcgacgcgcgcgaggtcaactcgatcccgctcttcaccgacgaccagaaccgg
caggtcgtggtccgggtcggcaagttcgggccgtacctgcagcgcagtaacacccaggtg
gccgacggggcggaggaggcgtcggaggaccgcgcctcgatcccggagggcgtcgccccc
gacgagctgacccgggagaaggtcgaagagctgttcctggccggcaacggcgaccggacg
ctcggcgacaacccggcgaccggcgagccggtgctggtcaaatccggccgcttcggcccc
tacgtgcagtccggcgagagcaagtcgtcgctgttccagagccagtcgccgcagaccctc
accctggagcaggcgctgcagctgctgtcgctgccccgggtggtcggcaaggaccccgag
ggcaacgagatcatcgcccgtaacggcaagttcggcccgttcatccagcggctcaaggac
tcccgctcgctggagagcgaggagcggctgttcaccgtcaccctggacgaggcgttggcg
atgctggccgcgccgaaggtccgcgggcagcgcggggcgcccaaaccgccgctgcgcgac
ctggagggcgtcgacccggtgtcggagaagccgttgctggtcaaggacggccggttcggg
ccgtacgtgaccgacggcgagacgaacgtgacgctgcggcgcgggcagacgccggaggag
ctgaccctgcaggaggcgatcgagatgatcgccgagaagcgggccaaggggccggcaccg
aagaaggcacccgccaagaaggccgcacccgcgaagaaggccgcggccaaggccgccacg
ccggccaagaaggcgacggccaagaaggccgcgccggcgaagaaggccgcaccccgcaag
gccgcggcctcctccgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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