KEGG   Athene cunicularia (burrowing owl): 113480931
Entry
113480931         CDS       T05777                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03420  Nucleotide excision repair
acun04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113480931 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113480931 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acun04121]
    113480931 (DDB1)
   03400 DNA repair and recombination proteins [BR:acun03400]
    113480931 (DDB1)
Ubiquitin system [BR:acun04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     113480931 (DDB1)
DNA repair and recombination proteins [BR:acun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113480931 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113480931 (DDB1)
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 113480931
NCBI-ProteinID: XP_026705935
Position
5
AA seq 1143 aa
MAGGAPGPLPHPPPRPDDRGVGAWHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGM
YGKTAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSE
TGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPT
ICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESI
TYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTL
KDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVMAMETFTNLG
PIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDS
HRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVR
LVSQDPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHE
VACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFE
SSHYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPT
VIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPL
FESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAP
HETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVY
PEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEK
ELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAV
EILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNL
GETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFH
TERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELT
RIH
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggctgggggggccccgggaccactcccccaccccccgccccggcctgacgatcgcggc
gtcggggcctggcatttcacctcggcagaggatttgaacctgctgattgccaaaaacacg
cgactggagatctatgtggtcacagcagaggggctgcggcccgtcaaggaggtggggatg
tacggcaagaccgctgtcatggagctcttccgccccaagggggagagcaaggatttattg
ttcatcctgacagccaagtataacgcctgcatccttgagtacaagcagaacggggacagc
attgatattataacccgggcccatggcaacgtgcaggatcgcatcggccgtccctcagag
accggtatcattggcatcatcgaccctgagtgccggatgattggcctgcggctctatgat
ggcctcttcaaggtcattcccctggaccgggagaacaaggagttaaaggcttttaacatc
cgcctggaagagctccaagtcatcgacgtgaagtttctctatggctgtcaggctccgacc
atctgcttcgtctaccaggacccccagggtcgccatgtcaagacgtacgaggtgtccctg
cgtgagaaggagtttaacaaaggtccatggaaacaggagaatgtggaggctgaagcctcc
atggtcatcgcagtgccagagccttttggaggtgcaatcatcattgggcaggagtctatc
acctaccacaatggagataaatatctagctatagccccacctatcatcaagcaaagtacg
attgtgtgccacaaccgcgtggaccccaatgggtcccgttacttgctgggggacatggaa
ggacgcctcttcatgctgcttctggagaaggaggaacagatggatggcactgtcaccttg
aaggacctgcgtgtggaactgctcggcgagacatccattgcggagtgcttgacctacctg
gacaatggagttgtgtttgtcggttctcggctcggggattcccagcttgtgaagctcaac
gtggacagcaatgagcagggctcctacgtaatggctatggagaccttcaccaaccttggc
cccatcgttgacatgtgtgtggtagacctggaaaggcaaggtcaagggcagctggtcacg
tgctcgggtgcatttaaagagggttccctgcggatcatccggaatggcattgggattcac
gagcatgccagcatcgacttgccggggattaaaggcttgtggccactgaggtcagactct
catcgtgaaacggacaataccttggtgctgtcctttgttggccagaccagggtgcttatg
ttaaatggagaggaggtagaagagacggagctcacagggtttgtggatgaccagcagact
ttcttctgtggcaacgtggcacaccagcaattgatccagatcacctctgcctctgtgaga
ctggttagtcaggatcccaaagccctggtgagcgagtggaaggagcccaacggaaagaac
atcagtgtggcttcatgtaacagtaaccaggtagtggtggctgtgggacgagccctgtac
tacctggagatccgaccccaggagctcagacagatcagctgcacagaaatggagcatgaa
gtcgcctgcctggacatcacacctttgggagacaccaacggcatgtccccgctgtgcgcc
attgggctctggactgacatctctgcccgcatcctcaagctgccttcgtttgagctgctg
cacaaggagatgctgggaggagaaattatccctcgctccatcctgatgacaaccttcgag
agcagccattaccttctgtgtgccctgggggatggagctctcttctactttggcctcagc
ctggagacaggtttgctgagcgaccgaaagaaggtgacccttgggacccagcccactgtt
ctgaggaccttccgctctctgtccaccaccaacgtgtttgcctgctccgaccgccccact
gtcatctacagcagtaaccacaagctggtcttctccaatgtcaacctgaaggaggtgaac
tacatgtgtcccctcaactcggatgggtatcccgacagcttggccttggctaataacagc
accctgacaatcggcaccattgatgagatccagaagctgcacatccgcacggttcccctc
tttgaatcacccaggaagatctgctaccaggaggtatcgcagtgtttcggtgtgctttcc
agtcgtattgaggtgcaggatgccagcgggggcaccactgcgctcagacctagtgccagc
acccaggccctgtccagcagcgtgagcaccagcaagctgttctccagcagcacggcgccg
catgagacatccttcggagaggaggtggaggtgcacaacctgctcatcatagatcagcac
accttcgaagtgcttcacgctcaccagtttctgcaaaacgaatacgccctaagcctggtc
tcctgcaagcttggcaaagatccgaacacctacttcatcgtgggcactgccatggtgtat
cccgaggaggcagaacccaaacagggccgcattgtcgtcttccactactctgacgggaag
ctgcagagcctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaac
ggaaagctgttagccagcatcaacagcacggtgcgtctgtatgagtggacagccgagaag
gagctgcgcacggagtgcaaccattacaacaacatcatggctctctacctgaagactaag
ggcgacttcatcctcgtgggagatctgatgcggtctgtcctactccttgcatacaagccc
atggaaggaaacttcgaggagattgcccgggacttcaatccaaactggatgagtgctgtg
gagattctggacgacgacaatttcttaggagcagagaatgctttcaatttgtttgtgtgc
cagaaggacagtgcggccacgaccgatgaggagcgccagcacttgcaggaggtggggctg
tctcacctgggagagtttgtcaacgttttctgtcacggttctctggtcatgcagaacctg
ggcgagacgtccacaccgacacagggctcagttctctttggcactgtcaacggcatgatc
ggcctggtgacttcgctgtcagagagttggtacaacctcctcctggacatgcagaacagg
ctgaataaagtcatcaagagtgtgggcaagattgaacactccttctggagatcgtttcac
accgaacgcaagacggaaccggctacagggttcatcgatggtgacttgattgaaagcttc
ctggacatcagcagacccaagatgcaagaggtggtggccaacttgcagatcgacgacggc
agcggcatgaagcgggaggccaccgtagacgacctgataaagatcgtggaggagctgacc
cggatccattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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