KEGG   Athene cunicularia (burrowing owl): 113487152
Entry
113487152         CDS       T05777                                 
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113487152 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acun03400]
    113487152 (LIG3)
Enzymes [BR:acun01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113487152 (LIG3)
DNA repair and recombination proteins [BR:acun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113487152 (LIG3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase aRib DUF3802
Other DBs
NCBI-GeneID: 113487152
NCBI-ProteinID: XP_026717375
Position
19
AA seq 995 aa
MPTGCRTLSQAARALGRGTGLFCPHTQVSLPRSYLCCVGLPAVSPSYWYHLLLRRVSLKF
AGRNQRGGAGDFHYSLLLNLWHRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCVFEKLEKARATTKKIEDITDLEGWEELQDEEKEV
INKHISEANSKASHTPKKKVIVQAKLTATGQLTTKDSLALTSPSPKKFSGFTAKPKNSED
VSANSSHKSSLSAKKCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETIRIFF
EQSKSCPPAAKSFLTIQEVDEFLIQLSKLTKEDDQQSVLQHITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQLEAEKAPGLKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKQVTKASDLADMITRVIREGLEGLV
LKDKKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVVAGEEDESTAGSSGENEGSSRSSTPHSTIKTPPSKSPAKAQKPEESKAVLGSPQKSEE
KRGEKRKASEMEDNGKKTLLDIFTGVKLYLSPSVKDFDKIRRYFIAYDGDLVPEFDTASA
THVIGDNIDDNPGAKRVSPNWIWECIRKRRLVAPC
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgcccacaggctgcaggacactatcacaggctgcccgggcactcggcaggggcacagga
cttttctgcccccatacacaggtctccttgccaagatcctacctttgttgtgttggcctc
cccgcggtcagccccagttactggtaccacctgcttttacggcgtgtatctctcaagttt
gcgggcagaaaccagcgtggtggtgctggggatttccattactccctgcttttgaacctt
tggcatcgccaagcctgcacagctgcagaggacatggcagagcagaggtactgtgtagat
tatgccaagcgtggcacagcaggctgcaagaagtgcaaggagaagatcgtgaagggaatg
gtgcgcattggaaagattgttcccaatcctttcacggagtctggcggggacatgaaggag
tggtaccatgtgaagtgcgtgttcgagaagctggagaaggcccgggccaccaccaagaaa
atcgaagacatcacagacttggaaggatgggaagagctacaagatgaggagaaagaagta
atcaataaacacatctcagaagctaattccaaggcttcacatacaccgaagaaaaaagtt
atagtccaagcaaagctcactgccacaggacagttaactacaaaagattcgttagctctc
acctctccgtcaccaaagaagttctctggcttcacagccaagccaaagaactcggaagat
gtctctgcaaactcttcccacaagtccagcctatctgcaaaaaaatgtgatccgaagcac
aaagactgcttgctgcgggagttcaggaagctctgtgccatggttgctgaaaagcctagc
tataatgtgaaaacacagatcatccaggatttcctgaagaagggatctggaggagatggt
tttcatggtgatgtatacctgactattaaactgctgttaccaggcgtcattaaaattgtt
tacaacttgaatgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatggtccgggacctggaacagggagatgtttcagagaccatacgcatcttcttt
gaacagagcaagtcttgtcctccagcagccaaaagtttcctgaccatccaagaggtagat
gagttcctaatccagctatcaaagcttactaaggaagatgaccagcaaagtgtgctgcaa
catatcactcgcaggtgtacaggcaacgacctgaaatgcatcatcaggctaattaagcat
gacttgaaaatgaatgctggagcaaagcatgtgttggatgctttggatcccaatgcttac
gaggcgttcaaagcgtcccgcaacctccaggacgtggtggagcgagtgctgaagaaccag
ctggaggctgagaaggcgcccgggctgaagcgcaccctcagcgtgcaggcctctctgatg
accccggtccagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaacggcatgtatgcagagatcaaatatgatggcgagcgggtgcaggtccataaa
aatggagatcatttcagctacttcagcagaagcctcaaacctgtccttccacataaagta
gcccattttaaggacttcatccctcaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttctgattgacaacaaaactggcaagccccttccttttgggactcttggt
gtccataagaaagctgctttccaagatgccaacgtttgtttgtttgtgtttgactgcatc
tatttcaatgacatcagcctgatggacaggcctctgtgtgaacgccgtaagtttctccac
gacaacatggttgaaatccccaaccggatccttttctcggagatgaagcaggtcacgaaa
gcttcagatcttgcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttaaaagataaaaagggtaattatgaaccaggaaaaaggcattggctgaaagtgaaaaag
gactacctgaatgagggtgcaatggctgacactgcagacctggtggtgctgggagctttc
tatggacaaggcagtaaaggtgggatgatgtccatcttcctcatgggctgctatgatccc
aagagtgagaagtggtgcactgtgaccaagtgctccggtggccacgatgacgccaccttg
gcgcgtctgcaaacggagctggatatggtgaagatcagcaaggatcctagtaaaattcca
aggtggctaaaaattaacaaaatctactacccagacttcattgtccctgatccaaagaaa
gctccagtgtgggagatcacgggggctgaattctctaaagctgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaaccttcagcagcttaaggagctgtaccaactctccaaagagaaggctgatttc
agtgttgttgctggggaggaagatgagtccacagctggcagtagtggagagaacgaggga
agttccaggtcttccacaccacacagcactattaaaactcccccaagcaagtcacctgca
aaagcccagaagccagaagagagcaaagcagtccttggatcccctcaaaaatcagaggag
aaacgaggggagaaacgaaaagcctctgagatggaagacaatggaaaaaagacgctgctg
gacatattcactggtgtgaagctgtacctgtcgccctctgtgaaggactttgacaaaatc
cgtcggtactttatagcatatgatggggatctcgtgccagagttcgacacagcctcagca
acgcacgtcataggggacaatattgatgacaatcctggtgctaagcgtgtgtctcccaac
tggatctgggaatgcatccggaaacggagactggtagccccatgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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