KEGG   Athene cunicularia (burrowing owl): 113487561
Entry
113487561         CDS       T05777                                 
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113487561 (TAF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acun03021]
    113487561 (TAF4)
   03036 Chromosome and associated proteins [BR:acun03036]
    113487561 (TAF4)
Transcription machinery [BR:acun03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113487561 (TAF4)
   Coactivators
    SAGA/TFTC/STAGA complex
     113487561 (TAF4)
Chromosome and associated proteins [BR:acun03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     113487561 (TAF4)
SSDB
Motif
Pfam: TAF4 TAFH tRNA-synt_1c
Other DBs
NCBI-GeneID: 113487561
NCBI-ProteinID: XP_026718028
Position
20
AA seq 1102 aa
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTASAAFSGTPVTANPTSAPAVAPLVNNGPGSVGKGNTVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGTGAPTVTLVRPPIHTAGPTVAAPGAAT
QNGSNTVINSTISVGNFPAVATATVGSGVSLQTSLVNSQSGSTVPAAPTTQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGAAQTTTLGTGTAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAVLLSSSV
QRTAGKATATVTSTLQQPVISLTQPTQVGVNKQGQSTPLVIQQSQKAGALIRPPQVTLTQ
TPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSSQVAAAQKNKLKEP
GGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRIL
EIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNISYKDDERYEQASDVRAQ
LKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRD
ANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRDL
IFCLENERETSHSLLLYKAFLK
NT seq 3309 nt   +upstreamnt  +downstreamnt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcagcagcaagatgggactgagtgcccca
gagatcacaaaagcaggagcaggaggagtgcaagggggcgttattaatcataacaccagg
tcccagacttcagctttggatggagccaccacaacaagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagatagggaccacgacagtg
caaactttgaatgggagtaacgtggtgatgaactctcaccatacagcaagtgcggctttc
tctgggactcctgtgactgcgaaccccacttctgcacctgctgtggcccctcttgttaac
aatggacctggatctgtggggaaaggaaatactgtcaatgctgttttgccatcagcttcc
aacactgtcatccagacttcgttccttaatactgctgtgtcctctgcatcttcctcctcg
cccacagttatctcctcgcagccaccaccaagcattggaactggggcacctacggtgacg
cttgtgaggccaccgatacacacagcaggacccacagtagctgcgcctggtgcagccact
caaaatgggagcaatactgtgatcaattcaaccatcagtgtggggaattttcctgctgtt
gctacagccactgtgggatctggagtttccctccagacgtcacttgtgaacagccagtct
ggttccactgtgccagcagctcccaccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aacacggtggcacaaagtctgccaaggactccaacagcaactacaagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtccttgtgcgtagtgagaacgggcagttg
ctgatgatccctcaacaagctttggcacagatgcaagcacaggcacatgcccagtctcag
cctcaaaatactatgactcctcgtcctgctacacctaccagtgctcctccagtgcagata
tcgactgtgcaggctccaggaacacctattattgcacgacaggtgacaccaactactatt
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacaacaacgctacagcgtcct
cctgttgtgcaacctcagattgttctgggtggtgctgcacaaacaactacgttggggaca
ggaacagctgtacaaactggaactcctcagagaacagtgcaaggaacgacagcaacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtcttcagagactgcggctaatgtgaaagaattg
gtacagaacctgctggatggaaaaattgaagcagaagacttcaccagtaggctgtacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcaacaaagtcagcagcagcagcca
acaacacaggcgacgatagcgacgattccgtctgcagcggtgctcctcagctcctcagtt
cagcgcacagcagggaaggcaactgcaactgtaacgagtactctccaacaacctgtaatc
agcctaactcagcctacacaagttggtgttaataaacaagggcagtctacaccactggtt
atccaacagtctcaaaaagcaggggcgttgataaggcctccgcaggtaacgttgacacag
acaccaatggtagcgctgcggcaaccacacagtcgtattatgctcactactcctcaaatt
caactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaacaaa
gctattgccactgtttcgtcacaagtagctgctgctcagaagaataaactgaaagaacct
gggggaggttcttttagggatgacgatgacattaatgatgttgcatcaatggctggagtc
aacctgtcagaagaaagtgctcgaatattggcaacaaactctgagctagtgggcacatta
acaagatcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggatatta
gaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctatgtttca
catgctacacaacaaagactacaaaacctcgtggaaaaattatcagagactgctcaacaa
aagaatatttcatacaaggatgatgaaagatacgaacaagcaagtgatgttcgagcacag
ctcaagttctttgaacaacttgatcaaatagaaaaacagcgtaaagatgaacaagaaagg
gaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatccagaacagcttagg
ttgaaacagaaggccaaggagatgcagcagcaagagctagcacagatgagacagagggat
gccaacttgactgcattagctgcgatcggtcccagaaagaaaaggaaagtagattcaccg
ggatctggatcagggacagagggatctggttcaagtgcagcagtcccaggcagctctgga
gttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctc
atattttgtttagaaaatgagcgagagacaagccattcactattgctatataaagcattc
cttaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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