KEGG   Athene cunicularia (burrowing owl): 113490792
Entry
113490792         CDS       T05777                                 
Name
(RefSeq) transcription elongation factor SPT5
  KO
K15172  transcription elongation factor SPT5
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113490792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acun03021]
    113490792
   03019 Messenger RNA biogenesis [BR:acun03019]
    113490792
Transcription machinery [BR:acun03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     113490792
  RNA polymerase I system
     113490792
Messenger RNA biogenesis [BR:acun03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     113490792
SSDB
Motif
Pfam: Spt5-NGN KOW DUF150_C Ribonuc_P_40 Arabino_trans_N DUF6406
Other DBs
NCBI-GeneID: 113490792
NCBI-ProteinID: XP_026723175
Position
Unknown
AA seq 534 aa
DELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAP
EHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSW
VRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQR
LFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFED
QPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLK
DMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDL
QLCSETASGVDAGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRK
KDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVC
KTRHLVLAGGSKPRDVTNFTVGGFTPMSPRISSPMHPSGAGEWLGLSPRPQGCP
NT seq 1605 nt   +upstreamnt  +downstreamnt
gatgagctctcggatgacatcacgcagcagcagctgctgcctggagtcaaggaccccaat
ctttggactgtgaagtgcaagattggtgaggagcgcgccacagccatcgctctgatgcgg
aaatttattgcttaccagtttaccgacacgcccctgcagatcaaatcagtggtggccccc
gagcatgtcaagggttacatctacgtggaggcctacaaacagacgcacgtcaagcaggcg
atcgagggggtgggcaacctgcgcatgggctactggaaccagcagatggttcccatcaag
gagatgaccgacgtcctcaaagtggtcaaagaagtcaccaacctcaaacctaaatcttgg
gtgcgcctcaaaagggggatctacaaagatgacattgcccaggtggattacgttgagccc
agccagaaccagatttccctcaaaatgatcccccgcatcgacttcgaccgcatcaaagcc
cgcatgagcttgaaggactggtttgccaagaggaagaagttcaagcgacccccgcagcgg
ctttttgacgctgagaagattcggtccctgggaggtgacgtggcgtctgacggcgacttt
ctcatcttcgaaggcaaccgctacagccgcaagggattcctcttcaagagcttcgccatg
tcggccgtgataacggagggggtaaagcccaccctatccgagctggagaagttcgaggac
caacccgaaggcatcgacctggaggtggtgacggagagcacagggaaggaaagagagcac
aacttccagcctggtgacaatgtggaggtgtgcgagggcgagctgatcaacctgcaaggc
aaaatcctcagcgttgacggcaacaaaatcaccatcatgcccaaacatgaggatttgaag
gacatgttggagttcccggctcaggagctgcggaaatatttcaagatgggcgaccacgtc
aaagtgatcgcggggcgttttgagggtgacacggggctgatcgtgagggtggaggaaaac
tttgtcatcctcttctccgacctcaccatgcacgagctcaaagttctgccccgggacctg
cagctctgctcggagacagcatccggtgtggatgctggggggcagcacgagtggggcgaa
ctggtgcagctggacccccaaaccgtgggtgtcatcgttcgcctggagcgagagaccttc
caggtgctgaacatgtacgggaaggtggtgacggtgcggcaccaggctgtcaccaggaag
aaggacaatcgcttcgccgtggccctcgactcggagcagaacaacatccacgtcaaggac
atcgtcaaagtcatcgatgggccgcactcgggccgtgagggggagatccggcaccttttc
cggggcttcgctttcctgcactgtaagaagctggtggaaaacggtggaatgttcgtctgc
aaaacccgacacctcgtcctggcggggggttccaagccgcgggacgtcaccaacttcacc
gtgggaggcttcacccccatgagcccccgtatcagcagcccgatgcaccccagtggggct
ggtgagtggttggggttgtccccgaggccacaggggtgtccctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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