KEGG   Acinetobacter sp. DUT-2: A0J50_01525
Entry
A0J50_01525       CDS       T04353                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
acw  Acinetobacter sp. DUT-2
Pathway
acw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A0J50_01525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acw03021]
    A0J50_01525
   03400 DNA repair and recombination proteins [BR:acw03400]
    A0J50_01525
Enzymes [BR:acw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A0J50_01525
Transcription machinery [BR:acw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A0J50_01525
DNA repair and recombination proteins [BR:acw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A0J50_01525
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AMO39515
Position
complement(328325..328603)
AA seq 92 aa
MARVTVEDCLDHVDNRFELVLVASKRARQLARQGMEPTVEWDNDKPTVVSLREIAAGHVT
KEILKQREQDYQTSSLDLALSTNSLNLEGFSF
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcacgcgtcaccgttgaagattgtttagatcatgtagacaaccgttttgagcttgtg
ctcgttgcaagtaaacgtgctcgtcaattggcacgtcaaggcatggagccaactgtagaa
tgggataacgacaaaccgactgtagtttctttgcgcgaaatcgcggctgggcacgttacg
aaagaaattcttaaacaacgtgagcaagattaccaaacttctagtcttgatcttgccctt
tctacaaacagcttgaatttagaaggtttttctttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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