KEGG   Anser cygnoides domesticus (swan goose): 106032231
Entry
106032231         CDS       T04896                                 
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
acyg  Anser cygnoides domesticus (swan goose)
Pathway
acyg03018  RNA degradation
acyg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106032231 (LSM6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106032231 (LSM6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acyg03019]
    106032231 (LSM6)
   03041 Spliceosome [BR:acyg03041]
    106032231 (LSM6)
Messenger RNA biogenesis [BR:acyg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106032231 (LSM6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106032231 (LSM6)
Spliceosome [BR:acyg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106032231 (LSM6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 106032231
NCBI-ProteinID: XP_013030543
Position
Unknown
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcctgcggaagcaaacccccagtgacttcctgaagcagatcatcgggaggcccgtg
gttgtgaagctgaattccggagtggattaccgaggtgtcctggcttgcctggatgggtat
atgaatatagctctggaacagacagaagaatacgtaaatggacaattaaagaacaagtat
ggtgacgcctttatccgaggaaataatgtattgtacataagcacgcagaagagaaggatg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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