KEGG   Anser cygnoides domesticus (swan goose): 106042720
Entry
106042720         CDS       T04896                                 
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
  KO
K08736  DNA mismatch repair protein MSH3
Organism
acyg  Anser cygnoides domesticus (swan goose)
Pathway
acyg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    106042720 (MSH3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106042720 (MSH3)
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     106042720 (MSH3)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-GeneID: 106042720
NCBI-ProteinID: XP_047910300
Position
Unknown
AA seq 1094 aa
MPRGRRRDRGGGCGGGVGHQPVLSRFFGPAASGAEPAVEVGAKRRTSSENNEPCEKKTKA
RQSTMDDIFNPLKTQGKKEPQKCEKPGICLQTLDRLREFCSDSDQQCNRVREDSFREKQS
MYLEKCPSITGRNPELKNPLQCGDTNPKVAQKEESHCDLSQFSASLKSYENTSDANLNKR
TKSIYTPLELQFIEMKKQYKDAVLCVECGYKYRFFGEDAEIAAKELNIYCHQDHNFMTAS
IPTHRLFVHVRRLVAKGYKVGVIKQMETAALKAAGENKSSLFSRKLTALYTKSTLIGEDV
NPLLKLDDSVDVEEVTTDVPDNYLLCICENGENVKDRRKGDILIGIMAVQPTTGEVVFDS
FRDCASRLELESRLLRLQPVELILPSSLSDQSEKLINSITSMRLRDDRIRIERMGNHHFE
YTHAFQLITDFYAKEVPDITGPQKLSVILSLDKPVICALAAVIAYLKEFNLEKMLYNPSN
FKRLSSETEYMTINGTTMKNLEILHNQTDMKTKGSLLWVLDHTKTSFGRRRLKKWVTQPL
MKSSEINARLDAVSEILLSESSVFGQIQNLLCKLPDIERGLCSVFHKKCSTQEFFLIVST
LSRLDLEIQALVPVINSHVKTPLLQNALLEIPELLSPVKHYLKVLNEEAAKTGDKTQLFK
DLTDFPLINKKKEEILEVLSKIQLHLLEIRKQIRNPSAEYVTVSGQEFLIEVKNSHISCV
PSSWVMVSSTKAVSRFHSPFIIENYRHLNQLREQLILVCGAEWLNFLDHFSEHYHPVSKA
IGHLATIDCLFSLAQVAKQGDYCRPVVQDNRQEIIIKNGRHPVIDVLLGEQDQYVPNTTN
LSGDGERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTIGVVDGIFTRMGAAD
NIYKGRSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATLEHFITDVES
LTLFVTHYPSVCELEKMYPEKVGNYHMAFLVNEEESADQKGSEEEENPEFITFLYQITKG
VTARSYGLNVAKLADIPEEILKKAAHKSKELERLVNMKRKTLKSFAEVWKINDSQELQKW
KSMCEPEDERMDSF
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgccgcgggggaggcggcgggaccgcggcggtggctgtggaggcggtgtcggccatcag
ccggtgctcagccgcttcttcgggccggcggcgagcggcgcggagccggctgttgaagtt
ggcgcaaaaaggagaacatcgtctgaaaacaatgaaccatgtgaaaagaagaccaaggca
cgacagagtaccatggatgacatctttaacccactgaagactcagggtaaaaaagaacct
cagaagtgtgaaaagcccgggatatgtttgcaaactctagacagactgagagaattctgc
agtgattcagaccagcaatgtaacagagtccgggaggatagttttcgagagaaacaatcg
atgtacttggaaaagtgtcccagtattactgggagaaatccagaactgaaaaatcctctt
cagtgtggggacactaacccaaaggttgctcagaaggaggagtcacactgtgatcttagt
cagttttccgcatcccttaaaagctatgaaaatacttcagatgcaaatcttaataagaga
accaaaagcatttacactccgttggaacttcaattcatagaaatgaagaaacagtataaa
gatgctgtgttgtgtgtggaatgtggatacaaataccgcttctttggagaagatgcagag
attgcagctaaagagctaaacatttattgtcatcaggatcataactttatgactgccagt
ataccaactcacagattgtttgtccatgtgcgacgacttgtagcaaaaggatataaggtt
ggagtaataaaacaaatggaaactgcagcgctgaaggctgctggagaaaacaaaagctct
ctcttcagccggaaactgaccgctctctatacaaagtctacacttattggagaagatgtg
aaccctttgctgaagctagacgattctgtagatgttgaagaggtaacaactgatgtccct
gataactacctcctctgtatttgtgaaaatggagaaaacgtaaaagacagaaggaaaggt
gacattcttataggcattatggcagtccaaccaactacaggagaagtcgtttttgacagt
tttcgggattgcgcatctcgcttagaattagagagtcggcttttgcgcctgcagccagtt
gaactaatacttccatccagcttgtcagatcaatctgaaaagctcatcaacagtataacc
tccatgaggttacgagatgacagaattaggatagaacgaatgggaaaccaccattttgaa
tacacacatgctttccaactaattacagatttttatgcaaaagaagtgcctgatattaca
ggtcctcaaaaactatctgtaatactaagcttggataagcctgttatttgtgctctggca
gcagtaattgcatacctcaaagaatttaatttagaaaagatgctttacaatccaagcaat
ttcaaacggttgtcaagtgaaactgaatacatgacaattaatgggacaacgatgaaaaat
ctcgaaattttacataatcaaactgatatgaaaacaaaaggaagcctactctgggtcttg
gatcatactaaaacttcctttggccgtcggagactgaagaaatgggtaactcagcccctc
atgaaatccagtgaaataaatgcccggcttgatgctgtgtctgaaattctcctgtcagaa
tccagcgtgtttggccagattcagaatcttctttgtaagctgccagatatagagagaggc
ctctgcagtgttttccacaagaagtgttcaacccaagagttcttcttgatagtcagcacc
ttgtctcgtctggacttggaaattcaagctcttgttccagtcataaattctcatgtgaaa
acgcctctattacaaaatgcactgttggaaatcccagaacttctctccccagtaaaacat
tatttaaaggttcttaatgaagaagcagccaagactggggataaaacccaactgttcaag
gaccttacagacttccccctcatcaataagaaaaaggaagagatcctggaggtgctgtct
aaaatccaattacatcttctggaaattcgtaaacaaattaggaatccttctgcagagtat
gttacagtttctggtcaagagtttttgatagaagtcaagaattcccatatatcatgtgtg
ccatcaagctgggttatggttagtagcacaaaagctgtcagccgtttccactctcctttc
attatagaaaattacagacatctgaatcagcttcgggagcagctaatccttgtctgtggt
gctgaatggctaaattttctagaccattttagtgaacattatcaccctgtgtctaaagcg
attggtcacctagcaactatcgactgtctgttctcattggcacaggtggctaaacaagga
gactattgcagaccagttgtgcaagataatcggcaagaaataatcataaaaaatggcagg
caccctgtgattgatgtactactgggagaacaggatcagtatgttccaaacaccactaac
ctttcaggagatggtgaaagggtcatgataataactggacccaacatgggaggaaagagc
tcctatataaagcaagttgcattgatcacagtcatggcacagattggttcctacgttcct
gcagaggagtcaacaattggtgttgtggatggtatttttaccagaatgggtgcagcagat
aatatttacaaaggccgaagtacctttatggaagaactgacagatactgctgagataata
agaaaagcaacttcaagatcgctagtaattttggatgaactgggaagaggaactagcaca
cacgatggaattgctattgcttatgctacactggaacattttattacagatgtggagtcg
ctgacactgtttgtcactcactatccctcagtttgtgagctagaaaagatgtatccagaa
aaagttggtaattaccacatggctttcttggtgaatgaagaagaaagtgctgaccaaaaa
ggatctgaagaggaagagaatcctgaatttatcacttttctctatcaaataactaaagga
gtcactgcaaggagttatgggctaaatgttgccaaactggcagatattcctgaagaaatc
ttgaagaaggcagctcacaaatcaaaggagttggagagattagtgaatatgaaaagaaaa
acgctgaagtcttttgctgaagtatggaaaataaatgattctcaggaactacagaaatgg
aaaagtatgtgtgaacctgaagatgaaagaatggacagtttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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