KEGG   Anser cygnoides domesticus (swan goose): 106049386
Entry
106049386         CDS       T04896                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
acyg  Anser cygnoides domesticus (swan goose)
Pathway
acyg03022  Basal transcription factors
acyg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acyg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106049386
  09124 Replication and repair
   03420 Nucleotide excision repair
    106049386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acyg03021]
    106049386
   03400 DNA repair and recombination proteins [BR:acyg03400]
    106049386
Transcription machinery [BR:acyg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     106049386
DNA repair and recombination proteins [BR:acyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     106049386
SSDB
Motif
Pfam: Ssl1 VWA_2 C1_4 VWA Matrix HscB_4_cys IBR
Other DBs
NCBI-GeneID: 106049386
NCBI-ProteinID: XP_013057137
Position
Unknown
AA seq 411 aa
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSKRAEKMTEL
SGNSKKHIIALKKAVDMNCHGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPT
NIYDLVKCLKAVKIRVSVISLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCHGEIKDQNVYIC
KVCQNAFCVECDMFVHDSLHCCPGCIHEHPAPPWLSVRCLRTRKAWMITEG
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggatgaggagcctgaaaggaccaagcgctgggaaggaggctacgagagaacatgggag
atcctcaaggaggacgaatcgggatcgctgaaagcgaccatcgaggacattctgttcaag
gcaaagaggaaaagactctacgaacaccatggacaagttcgactgggaatgatgcgtcac
ctttatgtggttgttgatggatcaaggactatggaggaccaggatttaaaaccaaacaga
cttacctgcactttgaagttactggaatattttgttgaagagtactttgaccaaaatcct
attagtcagatgggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaactcaaaaaagcacataattgctctgaagaaagcagtggatatgaactgccat
ggagaaccgtctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcttcagcagtctgacaacatgtgatccaacc
aacatctatgatctagttaagtgtttaaaagcagttaagatcagagtgtctgtcatcagt
ctaagtgctgaagttcgagtttgtacagtacttgcccgggaaactggtggaacataccat
gttattttagatgaaagtcattataaggaactgctaatgcatcatgttagtcctccacct
gccagttcaagttccgagtgctcccttattcgaatgggttttcctcagcacactattgct
tccctctctgatcaagatgcaaagccatccttcagcatggcgcaattggaaaacaacagt
gagccaggtcttacgctgggtgggtacttctgtccccagtgcagagcaaaatactctgaa
cttcctgtggagtgcaaaatctgtggtcttacattagtgtctgcacctcatctagctcga
tcttaccatcacttgttccctttggatgcctttcaggaaattccactggaagaatatcag
ggagaacggtattgtcaaggctgccatggagaaatcaaagatcaaaatgtttatatatgt
aaagtatgccagaatgcattttgcgtggagtgcgacatgtttgttcatgattctctgcac
tgctgtcctggctgtattcatgagcaccctgctccgccttggctttcagtgaggtgcctc
agaacaagaaaggcctggatgattacagaaggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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