KEGG   Acropora digitifera (stony coral): 107333589
Entry
107333589         CDS       T04352                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03013  Nucleocytoplasmic transport
adf03015  mRNA surveillance pathway
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107333589
  09122 Translation
   03013 Nucleocytoplasmic transport
    107333589
   03015 mRNA surveillance pathway
    107333589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107333589
   03041 Spliceosome [BR:adf03041]
    107333589
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     107333589
Spliceosome [BR:adf03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    107333589
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G_like MIF4G
Other DBs
NCBI-GeneID: 107333589
NCBI-ProteinID: XP_015753903
Position
Un
AA seq 707 aa
MSREKRKIFIEDNDGRARKRRRTSEVVDIEDRLESLITRVGEKSTSSLESNLEGLASVLE
ADLPNYKERILKIICTCASNLPEKITVYSTLVGLLNAKNYSCGEEFLDMILENLKDVLVA
AQFDRARLMVRFLADLVNCRVLMPSALLEFFNLLMAATMEGDIPQVRSDWFVYTILSSLP
WAGKELSDKKSQEFDQLLSTIESYTSQRNKNHIPALRVWSTDEPHPQEECLDCLWAQVKK
LKSDNWQEKHIRRPYLAFDDVLGDALEHTLPSFTVPPHKDCTVYPLPSVVYRMFDYTDVP
EGPSMPGAHAIERYLVEETIRRTLHAHFKDRKECANQLLNLPGNSKVPANYCIIEVLFSE
MFRLPNPHHVQVFYGSLIIELCKSQPNTMPGVVAQATELLYERLDSMNVDCVQRFVHWFS
YHLSNFQFKWGWDEWVSAVDSGSDSSQCVFLRELFERMRRSSYHQFLVEIIPEGLHCLLP
VVPAPNYRFATEQGEIPGADVAEQLLEAVRAKKDMDDLQAILNTVPANATGQEDVNQDVH
MIDHTFPLLRLEVLMHVVLKVGSKSFSHSFSAVTKFHKLLKNIIVNEEAQIHCLKIVNEF
WSTHPQFMLVLIDKLVRMQLIDCSAVVNWLFSKDVKDNFTKLYVWEIMTSTLKKMIKHTN
KVTGEVQEAKEKLAKLEEKTKKQVTFVSFLIQSQRMKTQISQMVTSL
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgtctcgagagaaaaggaaaattttcatcgaagataacgacggaagagcccggaagcgt
agaagaaccagtgaagttgtagatattgaggaccggcttgaatcgctcattactcgggtg
ggagaaaagagtacatcctctctggaaagtaatttagagggtcttgccagtgttctggaa
gctgatctgccaaactacaaagagcgaatccttaaaattatttgtacttgtgcatcaaat
ctacctgaaaaaattactgtatacagtacactggtgggacttttgaatgctaaaaattac
agttgtggtgaggagtttttagatatgatcttggaaaatcttaaagatgtccttgtggct
gcccagtttgatagagcaagattaatggtgcgatttcttgctgatctggtcaactgcaga
gttctgatgcccagtgcactattagagttcttcaacttgttgatggctgcaacaatggag
ggtgatattcctcaggttcgttctgactggtttgtttacaccattttgtcttcattgccc
tgggctgggaaggaactttcagataaaaagagtcaagaatttgaccaattgctatcaact
attgagagctacacaagtcagagaaacaagaatcacattccagctttgcgggtgtggtca
actgatgagcctcaccctcaagaagagtgtttggactgtctctgggctcaagtaaaaaag
ctgaaatcagataattggcaggaaaagcacataaggaggccatatcttgcatttgatgat
gtcttaggggatgccttagagcatacccttccatcatttacagttccaccacataaggat
tgcactgtttacccactaccaagtgtagtttatagaatgttcgattacacagatgttcca
gagggtccatctatgccaggtgcccatgctattgagagataccttgtggaggaaactatc
aggagaacgcttcatgctcattttaaagacaggaaagaatgtgcaaatcagctgttgaac
ttacctggaaattccaaagttcccgccaactactgcattattgaggtgctgttttcagaa
atgtttcggcttccaaaccctcatcatgtacaagttttttatggatccttaatcattgaa
ctctgcaaatcacagccaaacacaatgcctggagttgttgcacaagccactgaactatta
tatgaaaggcttgattctatgaacgtggactgtgtacaaaggtttgtgcattggttttct
taccacctcagcaactttcagtttaaatggggctgggatgagtgggtgtcagctgtagac
agtggatctgattcttcccagtgtgtattcttgagggaactttttgaaagaatgagaagg
tcctcgtatcatcagttcctcgttgagatcattccagagggattacattgccttctgccg
gttgtccctgcacctaattacagatttgcaacagaacaaggagagattcctggagcagac
gtcgctgaacaactcttggaagctgtgagggcaaagaaagatatggatgatcttcaagcc
attttgaacactgtgcctgcaaatgctaccggtcaagaagacgtcaatcaggacgtgcac
atgatcgatcacacgttcccactgctaagactggaggttttgatgcatgttgttttgaag
gttggctctaagtccttcagtcattcgtttagtgctgtgacaaagtttcacaaacttcta
aagaacataatcgtaaacgaggaagcacagatccactgtcttaagattgttaatgagttt
tggtccacgcatccccagttcatgttggtattaatagataaattggttcgcatgcaatta
atcgattgttcagctgttgtgaattggctgttttcaaaggacgtgaaagacaactttacc
aagctgtatgtatgggaaattatgacgagcactttaaagaaaatgatcaaacatacaaat
aaggttacaggagaagtacaggaggctaaagaaaagcttgccaaacttgaagaaaagaca
aagaagcaggtcacatttgttagtttcttaattcagtcgcaaagaatgaagacccaaatt
agccaaatggtaacttcactgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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