KEGG   Acropora digitifera (stony coral): 107344955
Entry
107344955         CDS       T04352                                 
Name
(RefSeq) transcription elongation factor SPT5-like
  KO
K15172  transcription elongation factor SPT5
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107344955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adf03021]
    107344955
   03019 Messenger RNA biogenesis [BR:adf03019]
    107344955
Transcription machinery [BR:adf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     107344955
  RNA polymerase I system
     107344955
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     107344955
SSDB
Motif
Pfam: Spt5-NGN KOW Spt5_N DUF4744
Other DBs
NCBI-GeneID: 107344955
NCBI-ProteinID: XP_015766127
Position
Un
AA seq 976 aa
MSDSEDSQFSDEEGEDITREEDDEDEEDEDEEDYDEDEEDYDERQRKKKRRHTGFILDEA
DVDDDIDEAEELPEDGFPDIIDSGERDEESNGEDLSGARRLQQMLGDKNAEELEAYYKKK
FAETSDRYKDDYELRPEIQQQSLLPGVKDPNLWTVKCKIGEEKSTVIGLMRKAISQQFTD
EPLQIKSAVAVEGLKGYIYIEAYKQTHVKQAIEGFGTLRLGKWQQMMVPIKEMTDVMKVV
KEVVSIKPKQWVRLKRGIYKDDLAQVDYVNTARNQVTLKMIPRIDYSRSRGLAKSAEDAG
EKRKKKRRPAPKLFDADAIRGIGGEIGQDGDFMIFEGSRYRGGFMYKTLAMSAIVVEGIK
PTLLELQKFETAPEDVELEVPLKSSKEGADEEQHTFVTGDVVEVFEGDLANLKGTILSIE
GNKITIMPKHEDLKDPLEFLASELQKHFKMGDHVKVIGGRYEGDTGLIVRVEDNMVVLFA
DLTMHELKVLPKDLQLCTERSSGVDSMGQHQWGDMVQLDPQTVGVIIRLDRDMFSVLNQH
GKVIQVKHQAVGRRRENKNAVALDSEQNSVQVRDIVKVIEGSHAGLQGEIKHLYRSFAFL
SSKMVIENGGMLVCKTKHLVLAGGGKAISNTLGISGFAPASPRITSPARDGGAFHNLFSC
PLQIVKDATETTARVELHSSCKTISVDRTRLSIVGGPTSRGSSVYTKTPMYGSQTPMYGS
RTPMYGSQTPTHGDGSRTPHYGSMTPSHDPSRTPSHGGAWDPTQPNTPARNEDFDYNFDT
STPSPGVYGTPNPATPGGYGGPYTPNTPGGGMYGSEPSYSPYTQTPSPATYGNPMTPGSV
APISPASPAFNPLTPGAGMEETHADWVTTDIEVRINENHEDPQLMDKRGVVRTVSGNTCT
VYLYDEKRDVSVSINNVDPGEPVKLDKVKVIMGDDRERVGTLINIDDPDGIIKMDQNDQL
KILPLKFLAKLGPTDL
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgtcggacagtgaagactcacaattttctgacgaggaaggtgaggatatcaccagagaa
gaggatgatgaggatgaagaagatgaagatgaggaggattatgatgaagatgaggaggat
tatgatgagaggcaaagaaagaagaagcgacggcacactggatttatcttagacgaagca
gatgttgatgatgatattgatgaagctgaggaactacctgaggatgggtttcctgatatt
attgactctggtgaacgagatgaagaatcaaatggggaggacttgtcgggtgccagacgc
ttgcagcagatgcttggagacaaaaatgctgaagagttggaggcttactacaaaaaaaag
tttgctgagacttcagaccgatataaagatgactacgaactgcgtcctgagattcaacag
cagagtctgttgcctggagttaaagaccctaatttgtggacggtgaaatgcaagattgga
gaggaaaagtcaactgttattggtttgatgaggaaagcaatctcccagcagtttactgat
gagccattgcagatcaaatcagccgtcgctgtggaagggctcaaagggtatatctacatt
gaagcttacaagcagacgcatgtcaaacaggccattgagggctttggcacccttcgactt
ggaaagtggcagcagatgatggtacctataaaagaaatgactgatgtaatgaaagttgtg
aaggaagtagtttctatcaaacccaaacaatgggtcaggttgaaacggggcatttacaaa
gatgatcttgcgcaggtggactatgtgaacacagccaggaatcaggttacactgaagatg
attcccagaattgattacagcagatcaagaggattagctaagtcagctgaggatgctggt
gaaaagagaaagaagaaaagaagaccagccccaaagctgtttgatgcagatgctataaga
ggaatcggtggagagatagggcaggatggagattttatgatctttgaaggcagtcgctat
cgtggaggatttatgtacaagacactggctatgtcagctatagttgttgaaggtatcaag
ccaactttgctagaacttcagaaatttgagacagcacctgaagatgttgaacttgaagta
ccacttaaaagttctaaagagggagctgatgaagagcaacacacatttgttactggggat
gttgtggaagtttttgagggtgatctggcaaatctgaaaggaacgattcttagcatcgag
ggcaacaaaataaccatcatgcctaaacatgaagacttaaaggatcctttagaattcttg
gcaagtgagcttcagaaacatttcaagatgggagatcatgtcaaggtcatcggtggtcgt
tatgaaggagacacgggtctcattgttagagttgaagacaatatggtggtactgtttgct
gacctaactatgcatgagctcaaagttctccctaaggaccttcaattgtgtactgagagg
agcagtggagtggactccatgggtcagcatcagtggggagatatggtgcagctcgatcca
cagacagtcggagttataattcgtttggacagagacatgttctcggtactaaatcaacat
ggaaaggtgattcaagttaagcatcaggctgtgggcagaagacgcgaaaacaaaaatgct
gtcgccttggattcggagcagaactcagttcaagtcagggacatagtgaaagttattgaa
ggatctcatgcgggcttgcaaggagagatcaagcatctgtatcgcagttttgcgttcttg
tcttcaaagatggtcatagagaatggtggcatgctggtttgcaaaacgaaacatcttgtc
ctcgcggggggtggcaaggccatttcaaatactttgggaatcagtggatttgctccagcc
tctccaagaataacaagcccagccagagatggaggtgcgtttcataacttattttcttgt
cctctgcaaattgttaaagatgccactgaaaccacagcgcgtgttgaactgcacagcagt
tgcaagaccatctccgtcgacagaacgagactgagcatcgttggtggccccacaagccgt
ggaagctcagtttataccaagacaccaatgtatggatcccagacccccatgtatggttca
cggactcccatgtatggttctcagactccgactcatggcgacggaagccgcactcctcat
tatggctcaatgacaccatcccatgatccttcacgcactccatctcacggtggagcttgg
gatccaacacaaccaaatactcccgcgcggaatgaagacttcgattacaattttgatact
tccaccccctccccaggggtttacggaacaccaaaccctgccacacccggggggtatgga
gggccatatactcctaacacccctgggggaggaatgtatggctcggagcccagttattct
ccctacacgcagacaccatccccggccacttatggtaaccccatgacacccggaagtgta
gccccgatatctccagcttctcctgcatttaatcccctaacccctggagccggcatggaa
gagacgcacgctgattgggtgacgacggacatagaagtgcgaataaacgaaaaccatgag
gaccctcagttgatggacaaaaggggtgttgtccgcaccgtctccggaaacacgtgcacg
gtttatttgtatgatgaaaaacgtgacgtcagtgtttctatcaacaatgtggaccctggt
gaaccggttaaactggataaggtcaaagtcatcatgggagatgatcgcgaacgcgtagga
accctgattaacattgatgatccagatggaatcatcaagatggatcaaaacgatcaactc
aagattcttccgctcaagtttctcgccaagcttgggccaacagatctttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (68)   

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