KEGG   Acropora digitifera (stony coral): 107352202
Entry
107352202         CDS       T04352                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4B-like
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03250  Viral life cycle - HIV-1
adf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107352202
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107352202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:adf04131]
    107352202
   03400 DNA repair and recombination proteins [BR:adf03400]
    107352202
Membrane trafficking [BR:adf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    107352202
DNA repair and recombination proteins [BR:adf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107352202
SSDB
Motif
Pfam: Vps4_C AAA AAA_lid_3 MIT
Other DBs
NCBI-GeneID: 107352202
NCBI-ProteinID: XP_015774023
Position
Un
AA seq 371 aa
FVDEAQGDKSKESIRQKCIQYLDRAEKLKTYVKSKNKKAVASVGGAKESKGKEDSSGEED
DDAQSKKLRGQLNSAIVMEKPNVQWADVAGLDSAKEALKEAVILPIKFPHLFTGRQLRIH
NSTLFFFSLINDLFLFVFTCRLVKQLFEMARDNKPAIIFVDEVDSLCGSRSENESESARR
IKTEFLVQMQGVGVDNKDVLVLGATNIPWTLDSAIRRRFEKRIYIPLPEASARVKMFELH
MGSLKHSIEPGQLRQLAEKTEGYSGADISIVVRDAMMQPVRKVQQATHFKKVRGPSPNDP
NIIMDDLLTPCSPGEPGAMELTWMQVPGEKLLEPLVNMTDMLRSLATSKPTVNSDDLKKF
EDFTRDFGQEG
NT seq 1116 nt   +upstreamnt  +downstreamnt
tttgtagatgaagctcaaggtgataaatctaaggagagcattcgacagaaatgtattcag
tacctagatcgagcagagaaacttaagacatatgttaaaagtaaaaacaaaaaggctgtg
gcatctgtgggaggagcaaaagagagtaaagggaaagaagatagcagtggggaagaagat
gatgatgcccagagcaaaaaactaagaggacagttaaatagtgcaattgtgatggagaaa
cccaatgtgcagtgggcagatgtagcaggattagactccgccaaggaagccctcaaagaa
gctgtcattctgccaatcaaattccctcatttatttactggtaggcaattgcgaatccac
aactcaacattattctttttttcactcataaatgatctcttcttgtttgtctttacttgt
agacttgtaaagcaactctttgagatggctcgtgacaacaagcctgccatcatttttgtc
gatgaagtagactccttgtgtggctccagaagtgagaatgaaagtgaatctgccagaaga
atcaaaacagaatttctagttcaaatgcagggggttggtgttgacaacaaagatgtcctt
gtgttaggtgccacaaatataccatggactctcgattctgcaataagaagaaggtttgaa
aagagaatttatattcctttacctgaagcatcagctcgagtgaaaatgtttgaacttcat
atgggaagcctcaaacattccatcgagccaggacaattacgacaacttgcagaaaaaaca
gagggatattcaggtgcagatatcagcattgttgtgcgcgatgccatgatgcagccagtt
cgaaaagttcagcaagcaacgcattttaaaaaggtcagaggaccgtctccaaacgaccca
aacattataatggatgacctcttaacaccgtgttctccaggagagcctggtgctatggag
ttgacttggatgcaagttccaggagagaagctattagaacctttagtcaacatgactgac
atgctacgatctctggcaacgtcaaaaccgactgtcaactctgatgacttgaaaaagttt
gaagacttcacaagagactttggacaggaaggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system