KEGG   Acropora digitifera (stony coral): 107354814
Entry
107354814         CDS       T04352                                 
Name
(RefSeq) superkiller viralicidic activity 2-like 2
  KO
K12598  ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107354814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107354814
   03041 Spliceosome [BR:adf03041]
    107354814
   03009 Ribosome biogenesis [BR:adf03009]
    107354814
   03016 Transfer RNA biogenesis [BR:adf03016]
    107354814
Enzymes [BR:adf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107354814
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     107354814
Spliceosome [BR:adf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107354814
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107354814
Ribosome biogenesis [BR:adf03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107354814
Transfer RNA biogenesis [BR:adf03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    107354814
SSDB
Motif
Pfam: MTR4_beta-barrel DSHCT DEAD MTR4-like_stalk Helicase_C ResIII nSTAND3 ATPase_2 AAA_22
Other DBs
NCBI-GeneID: 107354814
NCBI-ProteinID: XP_015776797
Position
Un
AA seq 997 aa
MADSFGEDLFAVFEENPAPVINRKTENEKKVGDSSSATEDSEGTSKFGEKRQFKPDVIDL
ALDENEAKKAKFDDLDSFLETIPRVNVMSVETTEACTHEVAVPEGCEHVPLTKKPAKPAK
EYPFILDPFQKESLKCLENNQSVLVSAHTSAGKTVVAEYAIAMSLQNKQRVIYTTPIKAL
SNQKYRELYEEFQDVGLMTGDVTINPSASALVMTTEVSYLAQTVMREVAWVVFDEIHYMR
DKERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWIAHLHKQACHVVYTDFRPTPLQH
YIYPAGGDGLFLVEDEKGEFREENFQKAMAVLREGGAESWNKRGRKGGTKGPSSCYKIVK
MIMERNFQPVIIFSFSKKECEAYALQMSKLDFNSAEEKKLVEEVFNNAIDCLSDEDKALP
QVEHVLPLLVRGIGIHHSGLLPILKETIEILFSEGLIKALFATETFALGLNMPARTVVFT
NARKFDGKDFRFITSGEYIQMSGRAGRRGIDDRGIIILIIDEKMGPDVGKGLLKGQPDPL
NSAFHLTYNMVLNLLRVEEVNPEIMLEKSFCQFQNYASVPGMIDKLKALEAERDSFRIPN
EESITAYYRIRQQLKKLANDMLVSTEYFGVSSSLSSISINFLHSVFTCGNQRTLRMLIVI
TKCSPLYVIQALLNCSSKSVKSADGETPMPCGPDEKGEMQVVPILLHLVQAISAVRLYIP
KDLRSLDSRQGVGKSLQEVKRRFPDGLPLLDPIEDMGIKDNGLRSVVRKTEMLEHRMFTH
PLHKDSSLESLYGQYEQKAKVIAQIKLVKKELKKTKTILQLDELKCRKRVLRRLGYATAA
DVIELKGRVACELSRLVMHGQYYIHSDNVTCSCKFSINNMFKASQITILLXESARRIGKV
SEEAKLNINVETYVEKFKPNIMDVVFAWANGASFAHICKMTDAFEGSIIRAMRRLEELLR
QMCQAAKAIGNTELENKFAEGIIKIKRDIIFAASLYL
NT seq 2994 nt   +upstreamnt  +downstreamnt
atggccgacagtttcggcgaagacctctttgctgttttcgaggaaaatccggccccagtt
atcaacagaaagacggaaaatgagaaaaaagtcggcgatagttcatctgcaactgaagac
tcggaaggtacctcgaaatttggcgaaaaaaggcagtttaaacccgatgttatcgacctt
gcgttggatgaaaatgaagcaaagaaggcaaaatttgacgatttggacagcttcttagaa
acaatacctcgcgtaaatgtgatgagtgttgagacgacagaagcatgtactcatgaggtt
gctgtccctgagggatgtgaacatgtccctttgacgaaaaaaccagctaagccagcaaag
gaatatccattcattttggatcctttccagaaagaatcgctgaaatgcttggaaaacaac
caatctgttttggtgtctgcacatacatctgcaggaaaaacagttgttgctgagtatgcc
attgcgatgtcgctgcagaacaaacaaagggtcatctatacaacacctattaaggctctt
agtaaccaaaaatacagagaattgtacgaagaattccaggatgttggcttgatgacagga
gatgtgactatcaaccccagcgctagtgcacttgtcatgacaacagaggtaagttacttg
gcacaaactgtaatgagggaagtagcttgggttgtctttgatgaaattcactacatgaga
gataaagagcgtggtgttgtgtgggaagaaaccatcatacttttacctgacaatgttcat
tacgtctttttatctgccacaattccaaatgccagacagtttgctgaatggattgctcat
cttcataaacaggcttgtcatgttgtgtatacagatttccgacccacacctcttcagcat
tatatttatcctgctggtggtgatggcttgttccttgtggaggatgagaagggggagttt
cgggaagagaatttccaaaaagccatggctgtgttaagagaagggggagcagagtcttgg
aataaaagagggcgcaaaggtggaaccaaaggtccatcaagctgttataaaattgtgaaa
atgataatggaaaggaattttcaacctgtcatcattttcagcttcagcaagaaagaatgt
gaagcatatgctctgcagatgtccaaacttgatttcaattcagctgaggagaaaaagctt
gtggaagaagtctttaacaacgccattgactgtttatccgacgaggacaaagcgctccct
caggtagaacatgtccttccccttttggttcgtggtattggtatccatcactcagggctt
ttgccaattctaaaggagacaattgaaatcctattctcagagggactgatcaaggctctc
tttgccacggaaacttttgctcttggtctcaacatgccagcaaggacagttgtgtttaca
aatgctaggaaatttgatggcaaagatttccgatttatcacttcaggagagtacattcaa
atgagtggcagagctggaaggcgtggcattgatgacagagggatcattatcttgatcata
gatgagaaaatgggtcctgatgttggaaaaggactgcttaagggtcaacctgatccgctt
aacagtgctttccatctcacatacaacatggtgttgaacttgctgcgtgtggaagaagtg
aatccagagatcatgttggagaagtccttttgccagtttcagaactatgcttcagtgcca
ggaatgatagacaaactgaaagctttggaagcggaaagagactcatttcgaatcccaaat
gaagaatctatcacagcttattataggatcagacaacagctgaaaaaactggccaacgac
atgcttgtgagtactgaatactttggtgtcagctcatcactttcgtcgattagcatcaac
tttctccattcagtattcacttgtggaaatcaaaggaccttgagaatgttgatagtgatc
acaaaatgtagtccgttgtatgtaatacaggcactgttaaactgctctagcaaatcagtt
aagtctgctgatggggaaacaccaatgccatgtggaccggatgaaaaaggcgaaatgcag
gtcgtaccaatcttgttgcatctggtccaagccataagtgccgtgagactgtatattcct
aaagacttaagatcactggacagcagacagggtgttggaaaatcactgcaggaagtgaag
cgtcgattcccagatggtcttcccttgctggatccaattgaagacatgggaatcaaagat
aatggattgagatcagttgttaggaaaacagagatgttggagcatcgcatgtttactcat
ccgcttcacaaagactcttcgttggagtcactgtatggtcaatatgaacaaaaagcaaag
gtaattgcacaaataaagttagtgaaaaaagaattgaagaagacaaagacaattcttcaa
cttgatgaactcaagtgcagaaaacgagtccttagaagactaggatatgcaacagctgca
gatgtgatcgaattgaaagggcgtgtagcatgtgagctgagcaggttggtaatgcatgga
caatactacatacatagtgataatgtaacatgcagttgtaagttcagcataaacaacatg
ttcaaggcttcccaaatcactattttgctataggagtcagcacgtcggattggaaaagta
tcagaagaagctaaactcaacattaatgtggaaacttatgtggagaaattcaagcccaat
attatggatgttgtgtttgcttgggcaaatggcgcctcatttgcacatatctgcaaaatg
actgatgcttttgaaggaagcattataagagctatgcgacgtttagaggaacttttgagg
caaatgtgccaagctgccaaggctattggcaacacagaactggagaataaatttgcagaa
ggaattatcaagatcaaaagagacatcatttttgcagccagtttgtacctttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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