KEGG   Alloalcanivorax dieselolei: B5T_00431
Entry
B5T_00431         CDS       T02259                                 
Name
(GenBank) putative RNA polymerase sigma factor containing a TPR repeat domain
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
adi  Alloalcanivorax dieselolei
Brite
KEGG Orthology (KO) [BR:adi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adi03021]
    B5T_00431
Transcription machinery [BR:adi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B5T_00431
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_12 TPR_2 TPR_1 Sigma70_r4 TPR_7 TPR_8 TPR_10 TPR_11 TPR_14
Other DBs
NCBI-ProteinID: AFT68716
UniProt: K0CB56
Position
complement(441829..443094)
AA seq 421 aa
MDSPASPALQRQVASLYQAESRRVLATLIRLLGDFDLAEEALQDAFIAAMEQWPRDGIPE
QPRAWLVSTGRFKAIDTLRRRARFDASQEEIARRLEKDVPPPGEEEELEDDRLRLIFTCC
HPALPADARVALTLREVCDLTTEEIASAYLVATPTMAQRIVRAKNKIRQAGIPYQVPERQ
ELNERLDSVLQVIYLVFNEGYFASSGDNLTRPDLSREAIRLGALLVELLPESEARGLLAL
MLLIEARRPARLDHQGDLILLEDQDRSLWDQDLIQQGTALVERALGEGRFGTYTLQAAIA
AVHGEAASADQTDWPQIVGLYDVLLRTSPSPVIELNRAVAVAMRDGWEAGLELVDELLAG
GQLDGYLPARAARADLLRRLGRHQDALRVYQEALTLSRQGAERRLLEKRVAELSSVIPSS
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacagccccgcctcaccggcgctgcaacgtcaggtggcctctctgtaccaggcggaa
tcccgccgggtactggccacgctcatccgcttgctgggcgacttcgatctggccgaggag
gctctgcaggacgccttcatcgccgccatggagcaatggccacgggacggcattcccgaa
cagccccgggcctggctggtctccaccggccgcttcaaggccatcgacaccctgcgccgg
cgcgcccgtttcgatgcctcccaggaggagatcgcccggcgcctggagaaggacgtgccg
ccacccggcgaggaagaagagctggaagatgaccgtctgcggctgatcttcacctgctgc
cacccggccctgcccgccgacgcccgggtggcactgaccctgcgggaggtgtgcgacctc
accaccgaggaaatcgccagcgcctacctggtggccacgccgaccatggcgcaacgcatc
gtgcgtgccaagaacaagatccgccaggcgggcatcccctatcaggtgccggaacggcag
gaactcaacgagcggctcgactccgtactgcaggtgatttatctggtcttcaacgagggt
tatttcgcctcctccggcgataatctgacacgcccggatctgtcccgtgaggccatccgt
ctcggcgctttgctggtggagttactgcccgaatccgaagcgcgcggcctgctggcgctg
atgctgttgatcgaggcccggcggccggcccgcctggatcaccagggcgatctgatcttg
ctggaagatcaggaccgctcattgtgggaccaggacctgattcaacagggcaccgccctg
gtggagcgcgccctgggcgagggccggttcggtacctatacgttgcaggccgccatcgcc
gcggtgcacggcgaagccgccagcgccgaccagaccgactggccgcagatcgtcggcctc
tacgacgttttgttgcgcaccagcccgtcgccggtgatcgaactgaaccgggcagtggcg
gtggccatgcgggatggctgggaagcgggtctggaactggtcgacgagttgctggccggc
ggccaattggacggctatctgccggcccgggccgcccgcgccgatctgctgcggcggctg
ggccgccatcaggatgcgctgcgggtctaccaggaggctctgacgctgagccgccagggg
gcggagcggcgcctgttggaaaaacgggtggcggagctgtcttctgttatcccatcttcg
ttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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