KEGG   Auricularia subglabra: AURDEDRAFT_109646
Entry
AURDEDRAFT_109646 CDS       T03129                                 
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13]
Organism
adl  Auricularia subglabra
Pathway
adl03013  Nucleocytoplasmic transport
adl03015  mRNA surveillance pathway
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_109646
  09122 Translation
   03013 Nucleocytoplasmic transport
    AURDEDRAFT_109646
   03015 mRNA surveillance pathway
    AURDEDRAFT_109646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_109646
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_109646
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     AURDEDRAFT_109646
Spliceosome [BR:adl03041]
 Complex C
  Other components
   EJC/TREX
    AURDEDRAFT_109646
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AURDEDRAFT_109646
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: EJD55246
JGI: 109646
AA seq 440 aa
MSGALDNEELIDYEEDQEVTTTTNGAPAPAAAQNGAAAPAAAAADGDKKNFTGIHSTGFR
DFLLKPELLRSISDLGFEHPSEVQQECIPQAVFGMDVLCQAKSGHGKTAVFVLATLQQLE
PVNGEVSVIVLCHTRELAFQIRNEYIRFAKYMPEIRTSVFYGGTPVQKDAEILKDKAKCP
HIIVATPGRLNALARDKVLDATHVKHFVLDECDKMLEQLDMRRDVQEIFRVTPHHKQVMM
FSATLAKDIRVTCKKFMTNPLEIFVDDETKLTLHGLQQHYVKLDEVAKNRKLNDLLDTLD
FNQVVIFVKSVARANELDKLLKECHFPSICIHSGLPQEERITRYQQFKSFEKRILVATDI
FGRGIDVERVNIVVNYDCPGDADSYLHRVGRAGRFGTKGLAITFISSETDQDVMNQIQSR
FEVAVSELPAHIDPKSYMTS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgtccggcgcgctcgacaacgaggagctcatcgactacgaggaggaccaggaggtcacc
accaccaccaacggcgcgcccgccccggccgctgctcagaatggcgctgcggctccagcc
gctgccgccgctgatggcgacaagaaaaactttacgggcatccactccacgggtttcaga
gacttcctgctcaagcccgagctgctccgttccatcagcgacttaggtttcgagcacccg
tccgaggttcaacaagagtgcatcccccaggcggtcttcggcatggacgtcctctgccag
gccaagtccggtcacggcaagacagccgtcttcgtgctcgcgacactccagcagctggag
cccgtcaacggcgaagtttcggtcattgtcctctgccacacccgcgagctggccttccag
atccggaacgagtacattcgctttgcgaagtacatgccggaaatccgcaccagcgtcttc
tacggaggcacgccggtgcagaaggacgcagagatcctcaaggacaaggccaagtgcccg
cacatcatcgtggccacgcctggccgcctgaacgccctcgcccgcgacaaggtcctcgat
gcgacacacgtcaagcacttcgttctggacgaatgcgacaaaatgctggagcaactcgac
atgcgccgcgatgtccaagaaatcttccgcgtcaccccgcaccacaaacaggttatgatg
ttcagcgctacccttgcaaaggacattcgcgtcacttgcaagaagttcatgaccaaccct
ctcgaaatcttcgttgacgacgagaccaagctcaccttgcacggcctgcaacaacactac
gtcaagttggatgaagtcgcaaagaaccggaagctcaatgaccttctggacacgctcgac
ttcaaccaggtcgtcatcttcgtcaaatccgtcgcgcgggcaaatgagctcgataagctg
ttgaaggagtgccacttcccgagcatctgtatccactccgggttgccccaggaggagcgc
attacgcgctaccagcagttcaagtcgttcgagaagcgtatcctcgtcgccacggacatt
tttggccgtggtatcgacgtggagcgcgtcaatatcgtcgtgaactatgactgcccgggt
gacgccgatagctacctgcaccgtgtcggccgcgctggccggttcggtacgaagggtctg
gcgatcaccttcatctcgtccgagaccgaccaggacgtgatgaaccagatccagtcgcgg
ttcgaggtcgccgtctccgagctgcctgcgcatatcgaccccaagagctacatgacctcg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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