KEGG   Auricularia subglabra: AURDEDRAFT_167424
Entry
AURDEDRAFT_167424 CDS       T03129                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
adl  Auricularia subglabra
Pathway
adl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AURDEDRAFT_167424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_167424
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     AURDEDRAFT_167424
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I Lact-deh-memb Mre11_DNA_bind ARD
Other DBs
NCBI-ProteinID: EJD43340
JGI: 167424
AA seq 967 aa
MMYTEESAEPKKTADFGGQSAPCDQAESAFCTFFHKLVQSDDTIRLFDRGEYYTVHGKDA
DFVALHVFRTTQVVKVLGKGMRKLNSVVLRPVLAKSFLREALTARQMRIEIWGIEDKKAN
KWALQRQASPGNLQDVEDLLFVNEDMSSAPIVMAVKLSSKGETKNVGVAFADASNREIGV
AEFVDNDLFSNTESLLIQLGVKECLLQSDEKKKEAADDEKKKDMDLAKLAQILERCNIVH
TARKAADFTGRNIEDDLRRLLKEDTTVAALPELDLKLAMQATAALTAYLALVSDDTNHGR
YALRRHDLAQYMRLDASGVRALGLFPAPQDQTLGGQRGKNTTLFGLLNKTRTGQGARLLA
RWLKQPLVNLHEIKKRQDLVEVFAEDGDARQTIQMEFLKAMPDFHRIGKRFQKKVAGLQD
VVRVYQAVQKLPPLIDNLEEMQGKLTQHQSDLVQSFFVQPLKASLHTNNHTLLEKYGEMV
ETTIDLEELDRSPNNYIIRSEHDEQLAKLATTIRRVRDGLDKEHAKAGRDLGLELDKKLH
LEKNDKYGYVFRVSKLDTKHIEGKRAYIQLATQKTGTFFRTQALADLATEFAEAAESYKA
KQAQLVKEIVEVAASYTEVLLALDDVIATMDVILSFAHVAMTAPTAYVKPTVLEMGTGNV
QLKEARHPCMEVQDEISFIPNDVEMIRGVSEFQIITGPNMGGKSTYIRQIGVIALMAQVG
SFVPCESATVPIFDSILARVGAGDSQLKGVSTFMAEMLETATILKSATQNSLVIIDELGR
GTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALDHQLPHVKNLHVVAHVAPRGTE
SKHDRDITLLYKVQPGICDQSFGIHVAELANFPESVLARRKADELEDFSGPAQEAFSQDV
IDAGTRLMQEMLSTWLAQHPGTATQGDDGDVVMEDATADIDALKQCYEQYRLELEANPWC
RSVLAGL
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgatgtacacagaagaatccgcggagccaaagaagacggcggactttggaggccagtct
gcgccctgcgaccaggctgagtctgccttctgcacgtttttccacaagctcgtccagagc
gacgatacaatccggctattcgatcgcggggaatattacaccgtccacggcaaggatgcc
gacttcgtcgcattgcacgtctttcgcacgactcaggtcgtcaaagtgcttggcaaaggc
atgcggaagctcaactccgtcgttctgcggcccgtgctcgcaaagagcttcctccgcgaa
gccttgacagcccgccagatgcgcatcgaaatatggggcattgaagacaagaaggcgaac
aaatgggctcttcaacgacaggcgtctcctggcaatctacaggacgtggaggacctgctc
ttcgtcaacgaagacatgtcctcggcgcccattgtcatggccgtaaagttatcgtccaag
ggagagaccaagaacgtcggcgtcgccttcgcagatgcgtccaaccgcgagattggcgtc
gccgagttcgtcgacaacgacctcttctccaacaccgagtccctgctgatccagctgggc
gtgaaagaatgtttgctgcaatcggacgagaagaaaaaggaggcagcggacgacgagaag
aagaaagatatggacctcgccaagttggcacagattctcgaacggtgcaatattgtgcat
actgcacgcaaagcagccgacttcaccggccgcaacatcgaggacgacctccgccgtctg
ctcaaggaggacaccaccgtcgccgccctcccggagctcgacctgaagctcgcgatgcaa
gccacggcggcgctgacggcgtacctcgccctcgtctcggacgacacaaaccacggacgg
tatgctctgcgccggcacgacctcgcgcagtacatgcgcctcgacgcgtcgggcgtgcgc
gcgctcggcctcttccccgcgccgcaggaccagacacttggagggcagcgcggcaagaac
accacgctcttcggcctgctcaacaagacgcgcacggggcagggcgcgcggctgctggcg
cggtggctcaagcagccgctggtgaacttgcacgaaatcaagaaacggcaggacctcgtc
gaggtcttcgcggaggatggtgacgcacgacagacgatccagatggagtttttgaaggcc
atgcccgacttccatcggattggcaagcggttccagaagaaggtcgcgggactgcaggac
gtagtccgtgtctaccaggccgtgcagaagttacctcccctcattgacaatctcgaggag
atgcagggcaaactgacccagcaccagtcagaccttgtccaatcgttctttgtgcaaccc
ctcaaggccagcctgcacaccaataaccacacactgctcgaaaagtacggcgagatggtc
gagacgacgatcgacctggaggagctcgaccgctcgccgaacaactacatcatccggtcc
gagcacgacgagcagctggcgaagctggcgacgacgatccggcgcgtgcgcgacgggctg
gacaaggagcacgcgaaggccgggcgcgacctgggcctcgagctcgacaagaagctacac
ctcgagaagaacgacaagtacggctacgtcttccgcgtgagcaagctcgacacgaagcac
atcgagggcaagcgcgcctacatccagctcgcgacgcagaagaccggcacgttcttccgc
acccaggccctcgcggacctcgccaccgagtttgccgaggccgcggagagctacaaggcc
aagcaggcgcagctcgtcaaggagattgtcgaggtcgccgccagctataccgaagtgctg
ctcgcgctcgacgatgtgattgcgaccatggacgtcatactcagctttgcgcatgtcgcg
atgactgcccccacggcgtacgtcaagccgaccgtgctcgagatgggcaccggcaacgtg
cagctcaaggaggcgcgccacccgtgcatggaggtccaggacgagatcagcttcatcccc
aacgacgtcgagatgattcgtggcgtcagcgagttccagatcatcactggacccaacatg
ggcggcaagtcgacctacatccgccagattggtgtaattgcgctcatggcgcaggtcggg
agctttgtgccgtgcgagagcgcgacggttcccatcttcgactcaatcctcgcgcgcgtg
ggcgcgggcgacagccagctgaagggcgtgtcgacgtttatggccgagatgctcgagacg
gcgacgatcctcaagtccgcgacgcagaactcgctcgtcatcatcgacgagctcggccgc
gggacatcgacgtacgacggcttcgggctcgcttgggccatctctgaacatattgcctcg
caaatcagggcgttttgtctgttcgcgacgcacttccacgagctgaccgcgctcgaccac
caactgccgcacgtcaagaacttgcacgtcgtcgcgcacgttgcgccccgcgggacggaa
tccaagcatgaccgcgacatcaccctgctgtacaaggtccagcctggtatctgtgaccag
agcttcggtatccacgtcgccgagctggccaacttcccggaaagcgtcctggccagacgc
aaggcggatgagctggaagacttcagcgggcctgcacaggaagcattctcgcaggacgtt
atcgacgccggcacacggcttatgcaggaaatgttgtcaacgtggctcgcgcagcacccg
ggcaccgcgacgcaaggcgacgacggtgatgttgtcatggaagatgccacggccgacatc
gacgcgctgaagcagtgctatgagcaatatcgcttggagctggaagccaacccgtggtgc
cgttctgtgctggctgggctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (47)   

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