KEGG   Auricularia subglabra: AURDEDRAFT_178289
Entry
AURDEDRAFT_178289 CDS       T03129                                 
Name
(GenBank) SNF5-domain-containing protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
adl  Auricularia subglabra
Pathway
adl03082  ATP-dependent chromatin remodeling
adl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    AURDEDRAFT_178289
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AURDEDRAFT_178289
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:adl01009]
    AURDEDRAFT_178289
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adl03021]
    AURDEDRAFT_178289
   03036 Chromosome and associated proteins [BR:adl03036]
    AURDEDRAFT_178289
Protein phosphatases and associated proteins [BR:adl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     AURDEDRAFT_178289
Transcription machinery [BR:adl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     AURDEDRAFT_178289
    SWI/SNF complex
     AURDEDRAFT_178289
Chromosome and associated proteins [BR:adl03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    AURDEDRAFT_178289
   PBAF complex
    AURDEDRAFT_178289
   SWI/SNF complex
    AURDEDRAFT_178289
SSDB
Motif
Pfam: SNF5 HD-ZIP_N DNA_gyraseA_C
Other DBs
NCBI-ProteinID: EJD32617
JGI: 178289
UniProt: J0D1Y9
AA seq 555 aa
MNLKDQFEWDIVNSSNSPEHFAEVYCSDLGLGGEFKTAVAHCIREQSQVHMKSLFVVGHP
MDGTPILEEEVKQTFLPPIDIAARSFEQTSTFTPIIDYLSDGEIERTEKEREKELKRKRR
QTKGKRGIALPDRDPVRTHRTPAIGFPDMDPSLASSGITAPTSSKRAAAAAASATIAVMV
ASENEGGGGRYSAPVNLPEKAVQPPKPTRTRGLYKPPPIPNPIENPRAQMTKTENTALAS
TDRATRPPDSSGSTRLTAFHRPKDEFVAEGQHKNIIDGVWHCSNCGAPDGIAVGRRKGPN
GIKSQCGPCGKYWHQHRKPRPVQYSTDRAWHERQLREMSKKGKRSRVLPNIHTDLPPSHN
RVDDGPYQPLDVGASSPQSTMSSMSQQSVELPLAKKARINGNAPVSREAPRAASPPQLPP
APPPVPVVMPTNAAPPPPSGGDNGVQHVSAPPYPTDGSGPSLSPLARPEWLMTALKGMQD
KYPDDRFDVIQRPRMQTEQTPDDEIWRVKCFDCPGKLYKPGPAQSLDNFEVHLRNRLHRQ
KVAARVSGAPPPSAS
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaacctgaaggatcaatttgagtgggacatcgtcaactcgagcaactccccggaacat
tttgccgaagtgtattgcagcgatcttggactgggcggcgagttcaaaaccgccgtcgcc
cactgcatccgcgagcagtcgcaagtacatatgaaatccttgtttgtggtcggccatcct
atggacggcacacctattcttgaagaagaggttaagcagacgttcttgccgcccatcgac
atcgctgcgcggtcattcgagcagacgtcgacgtttacgcctatcatcgactacctcagt
gacggcgagatcgagcgcacagagaaggagcgggagaaggaactcaagcggaagcgacgg
cagacgaaaggcaagcgcggtatcgcgttaccagacagagaccctgtcagaacacaccgc
acgcccgccatcgggttccccgacatggacccatcgctcgcatcttcaggcatcactgca
ccgacctcgtcgaaacgtgcggccgctgccgccgcctcggccaccattgctgttatggtc
gcgtctgagaacgaaggcggcggtggccgctacagtgcgcctgtcaacttgcctgagaag
gctgtccagccgcccaagcctacacgaactcgtgggctctacaagccgccgcccatcccg
aatccgatcgagaacccgcgcgcgcagatgaccaagacggaaaacacggccctcgcatcc
acagaccgggcaacacgaccgccagactcatcgggttcaacgcgcttaacggccttccat
cggcccaaggacgaatttgtcgccgagggacaacataagaatatcattgacggtgtttgg
cactgctcgaattgcggagctcccgatggtatcgctgttggtcgacgcaagggccctaat
ggcattaaatcgcagtgcggtccctgtggcaaatactggcatcagcatcgcaagccgcgg
cctgtgcagtattcgacggaccgagcgtggcacgagcggcagctccgggaaatgtcgaag
aagggcaagcgctcgcgcgtgctgcccaacatccataccgacttgccaccttctcacaat
cgggtggacgatgggccttatcagccgctcgatgtcggtgcttcttctcctcaatccacc
atgtcgagcatgagccagcagagcgtggagctacccttagccaagaaggcgcgtatcaac
ggcaacgcgcccgtctctcgcgaggctccccgcgccgcatcgccgccgcagctgccacct
gcacccccgcccgttccggtggtcatgccgaccaacgccgcccctccaccaccgtcgggc
ggcgacaatggcgtccagcatgtgtccgccccgccgtatccgacagacggttccgggccc
agtctttctccacttgcccgccccgagtggttgatgaccgccttgaagggcatgcaggac
aagtatccagatgaccgcttcgacgtcatccagcgtccccgcatgcagactgagcaaaca
cccgacgacgaaatctggcgtgtcaaatgcttcgattgcccaggaaagttatacaagcct
ggcccggcgcagtcgctcgataacttcgaagtccatttgcgcaacaggctacaccgtcaa
aaggtggccgcgcgcgtcagtggcgcccctcccccctccgcgtcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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