KEGG   Auricularia subglabra: AURDEDRAFT_20894
Entry
AURDEDRAFT_20894  CDS       T03129                                 
Name
(GenBank) pseudouridine synthase
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
adl  Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:adl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:adl03016]
    AURDEDRAFT_20894
Enzymes [BR:adl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     AURDEDRAFT_20894
Transfer RNA biogenesis [BR:adl03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AURDEDRAFT_20894
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: EJD34883
JGI: 20894
UniProt: J0LDT5
AA seq 411 aa
YQGWTRDELVARLHKLEMEKDSRTRAKRAETLKAWKGENDFDFSKCYRRKIALKFCYDGW
EYNGLASQGEPTALPTVEAVLQEALYKKRLIDPNAGPAGCDWDRCGRTDKGVSAASQVVS
LWIRTAKKEFPYVSMLNRVLPPSLRILAWAPVADTFSARFNCRYRHYKYFFSPDGIDLAR
MRAGAALLLGEHDFRNLCKLDAAKQISNFRRRIDRADISEVEGTGGALYVFDLIGTAFLW
HQVRHIMAVLFMVGSGAEPVELMRALLNVDGADAEVETVDRKPEYQMADGLPLVLWDCAY
DPADVPWVQDVDEDEDTNTDANEPSRLLDQMSGIHTRSLIQATMHKHFLDTARRYRITGA
KNPNCVDVLLGAGHVKTLSRYQPVLQRKRLENVEVLNERWRQGKGARRATR
NT seq 1233 nt   +upstreamnt  +downstreamnt
taccagggctggacacgtgacgagctcgtagcccgccttcacaaactggaaatggagaaa
gacagcaggacgcgcgccaagcgcgccgaaacgctcaaagcctggaaaggcgagaacgac
ttcgacttttcgaagtgctatcggcgcaagatagctttgaaattctgctacgacggctgg
gaatacaacggactggcttctcagggcgaaccaactgctctgccgactgtagaagcagtt
ctgcaggaggcgctgtacaaaaaacgccttatcgatccaaatgccggccctgctggctgc
gattgggatcgatgcggacgcacggacaagggtgtcagcgctgccagccaggttgtttcg
ctctggattcgcacagccaagaaggagtttccgtatgtctcgatgctgaaccgtgtgcta
ccgccgtcgcttcgcattctggcctgggcaccggtcgccgacaccttttctgcgcggttc
aactgccgctaccggcactacaagtacttcttctcgccggatggcatagacctcgcgcgg
atgcgcgccggcgcagcgctcctgctcggcgagcacgacttccgcaacctctgcaagctc
gacgcggcgaagcagatcagcaacttccgccggcgcatcgaccgcgcagatatctctgag
gtcgaaggcacgggcggcgcgttgtacgtgttcgacctcattggcacggcattcctctgg
caccaggtgcggcacatcatggccgtgctcttcatggtcggcagcggggcggagcccgtc
gagctcatgcgcgcgctgctcaacgtcgacggcgccgacgcagaggtcgagacggtcgac
cgcaagccggagtaccagatggcggatggcctgccgctcgtgctgtgggactgcgcatac
gacccggccgatgtgccgtgggtgcaggacgtcgacgaggacgaggacactaacaccgac
gcgaacgaaccgagccgcctgctcgaccagatgtctggcatccacacccgctcgctcatc
caggccacgatgcacaagcatttcctcgatacggcgcgccgctaccgcatcactggggcg
aagaacccgaactgcgttgacgtgctgcttggtgcgggccatgtgaagacgttgtcgcgc
tatcagcctgtgcttcagcgcaagcggctcgagaatgttgaggtgctcaacgaacgatgg
aggcaagggaaaggcgcacgacgagctactcgc

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system