KEGG   Alicycliphilus denitrificans BC: Alide_3044
Entry
Alide_3044        CDS       T01397                                 
Name
(GenBank) pseudouridine synthase, RluA family
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
adn  Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:adn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:adn03009]
    Alide_3044
Enzymes [BR:adn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Alide_3044
Ribosome biogenesis [BR:adn03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Alide_3044
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: ADV00770
UniProt: A0AA85YH79
Position
complement(3163301..3164299)
AA seq 332 aa
MAGDGLPWPDEESDPQRTAEEESDAELREVMVPAAQHQARLDKALAELVPEFSRSYLQQL
LAQGDVRLNGQPAAKPAHKVRAGDQVAVRMRPTQQSQAFKPESLPLDVVHEDEHLLVIDK
PAGLVVHPAPGNWSGTLLNALLGRDAQAMQVPRAGIVHRLDKDTSGLMVVARNRAAMDAL
VRMIAAREVSRQYLALAWGAWSGSEQRRIRAPIGRDPRNRLRMAVVDLGQHAGKEACTDF
DLLASGEEVCLVRCTLHTGRTHQIRVHMASIRHPLVADALYGGAVGGPMRRQALHAFRLA
FTHPVTGKPMEFHAPLPEDMRQALDFWGLRYN
NT seq 999 nt   +upstreamnt  +downstreamnt
gtggcaggcgacgggctgccgtggccggacgaggagtccgacccgcagcgcactgccgag
gaggagtcggacgccgagctgcgcgaggtgatggtgcccgccgcgcagcaccaggcgcgc
ctggacaaggccctggcggaactggtgccggagttttctcgcagctatctacagcagctg
cttgcgcagggtgacgtgcgcctcaacggccagcccgccgccaagcccgcccacaaggtc
agggccggagaccaggtggcggtgcggatgcgccccacgcagcagagccaggccttcaag
cccgagagcctgccgctggacgtggtccatgaggacgagcatctgctcgtcatcgacaag
ccggcgggcctggtggtgcatccggcgccgggcaactggagcgggactctcctcaacgcc
ctgctcgggcgcgatgcgcaggccatgcaggtgccgcgcgccggcatcgtgcaccggctg
gacaaggacacgagcggtctcatggtggtggcgcgcaaccgcgcggccatggatgcgctg
gtgcgcatgatcgcggcgcgcgaggtgagccgccagtacttggcgctggcctggggcgcg
tggtcgggctcggagcagcgccgcatccgggcgccgatagggcgcgacccgcgcaaccgc
ctgcgcatggcggtggtggacctcggccagcatgccggcaaggaggcgtgcaccgatttc
gacctgctcgcgtccggcgaagaggtatgcctcgtccggtgcacgctgcacacgggcagg
acacatcagatacgcgtgcacatggcgtccatccgccaccccctggtggccgacgccctg
tatggcggtgccgtgggcggccccatgcggcggcaggccctgcacgccttccgccttgcg
ttcacccaccccgtgaccggcaagcccatggagttccacgccccgctgcccgaggatatg
cgccaggcccttgatttctggggcttacgctacaattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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