KEGG   Achromobacter denitrificans: APT56_09545
Entry
APT56_09545       CDS       T04244                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
adt  Achromobacter denitrificans
Pathway
adt02024  Quorum sensing
adt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APT56_09545
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APT56_09545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adt03019]
    APT56_09545
   03036 Chromosome and associated proteins [BR:adt03036]
    APT56_09545
Messenger RNA biogenesis [BR:adt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     APT56_09545
Chromosome and associated proteins [BR:adt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    APT56_09545
SSDB
Motif
Pfam: Hfq LSM SRP14
Other DBs
NCBI-ProteinID: ALX83395
UniProt: A0A1Z3GXQ9
Position
2136917..2137153
AA seq 78 aa
MSNKGQTLQDPFLNTLRKDHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaactctgcaagatccgttcctgaacacgctgcgcaaggatcat
gtgccggtgtcgatctacctggtgaacggtatcaagcttcaagggcaaatcgaatctttc
gaccaatacgtggtgctgctgcgtaacacggtcacgcaaatggtctacaagcacgccatt
tccaccgtcgttcccgcgcgcgccgtgaatttccaggtggaagtccctgctgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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