KEGG   Arachis duranensis: 107462138
Entry
107462138         CDS       T04300                                 
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
  KO
K12600  superkiller protein 3
Organism
adu  Arachis duranensis
Pathway
adu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107462138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adu03019]
    107462138
Messenger RNA biogenesis [BR:adu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     107462138
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_11 TPR_16 TPR_8 TPR_14 TPR_19 TPR_17 TPR_12 TPR_9 TPR_6 TPR_7 BTAD TPR_15
Other DBs
NCBI-GeneID: 107462138
NCBI-ProteinID: XP_015936190
UniProt: A0A6P4BW72
Position
8:complement(31771735..31780421)
AA seq 1183 aa
MESQTHNEEQGVEHLFRRLQDFPDDASLHFDIGLFLWEKGGEANGSTEKAAEHFIESAKL
NPKNGEPFKYLGHYYGRISIDTQRALKCYQRAVALNPDDSDSGEALCNLLYQGGKDSLEA
AVCREASEKSPRAFWAFRRLGFLQVHQKKWSEAVQNLQHAIRGYPTCAELWEALGLAYQR
LGRYTAAIKSYGRAIELDDKMVFALVESGNISLTLGSFRKGVEQFRQALEISSQCVPAQY
GLALGLLCLAKDCMNLGAFKWGASLLEEASEVARASAYSVRNVSCIWKLYADVQLAYARC
YPWIEEVQELEANKEAFSASIISWRRTCLSAARLARFSYQRALHLCPWQANIYADIAVTS
DLITSLDKDYERDLDACRQLPEKMCVGALLLEGDNYEFWVTLGCLSDQNALNQHALIRGL
QLNVSLAVAWGYLGKLYSKMSKKKLARQMFDRARSIDPSLALPWASMSADCCVRESAPDE
AFESCSQAVQMMPLAEFQIGLTKLAMLSGHLSSTQVFGAIQQAVQRSPHYPESHNLHGLV
CESRKDYRSAAISYRIALHAISIALLDNQNSQIKDVSINLARSLCKAGNAVDAIQECENL
RKEGMLDFEVFQVYAISLWQLGKNDLALSIVRSLAASVSSMEKTAMEISVSFIFRLLYYI
SGLDAVITNIMKMPKELIQSSKVNFVMSAIDALDGHNRLGFLVSRNLYFLNDHDEIDRVH
FLIALGKLVKNGHDGFLAVQSGIAYLKRILHMFPNCSLIRNLVGYLSLSGKESNSCHLAT
RCCKLDHLDLSDKEGLKSASDIHGAAVVACYANGNSNPKSTFQTCTNQCSRGPAAIRYLQ
RYFHQKPWNHDARYLLILTYFQRAREERFPHQLCVILNRLICVALSNEFCGKKEMCYEYR
QFQLLLCASEISLQCGNHITSISHAQKASVLVLPDNYLFFAHLLLCRVYAIKGDLLNCKK
EYIRCLELRTDCHIGWMSLKLMECHYQLQIDSNVIDSNFEECLKKGANSWNMWIAVYNLV
RGLISFHQKDLISAEELMREACSMAGFESCLFLCHGAICMELARQYGGSMLLSWAVDSLN
RFHELLPISLPLASLLVAQAEGSLGAKDKWDRSIRLEWYSWPSVMRPAELYFQMHLVVRQ
LKDGPNVTGRLESSHSAWRWVIRAIHMNPSCMRYWKVLQKLMQ
NT seq 3552 nt   +upstreamnt  +downstreamnt
atggaatctcaaacacataatgaggaacaaggtgtagaacatctcttcagacgcttgcag
gatttcccagacgatgcgtcgctgcattttgatattggcttattcttatgggaaaaagga
ggagaagcgaatggatccacagaaaaagcggctgaacatttcattgaatcagccaaattg
aaccccaagaatggagaacctttcaaatatcttggtcattattatggccgcatttccatt
gatactcagagagcccttaagtgttatcagcgagctgttgctctcaatcctgatgattct
gattctggggaagctctttgcaatttactataccaaggaggaaaggatagtttggaggca
gcagtatgtcgtgaagcttctgaaaagtcaccaagggccttttgggcattccgtagattg
ggtttcctgcaggttcatcagaagaaatggtccgaagctgttcagaatcttcaacatgcc
atacgaggctatcctacatgtgctgaactgtgggaagctttgggccttgcttatcagcga
ttgggcaggtatactgcagccataaagtcttatggccgtgccatcgagttggatgataag
atggtctttgctttggttgaaagcggaaatatctcattgacacttggttcatttaggaag
ggagttgaacaatttcgacaagctttggagatttcatcacaatgtgtgcctgcacaatat
gggcttgctttggggctgctttgtttagcaaaagattgcatgaacctgggagcatttaag
tggggggcttctttattagaggaagcatctgaggttgcaagagcaagtgcttattctgtt
aggaatgtctcatgtatttggaaactatatgctgatgttcagcttgcatatgcaagatgt
tatccttggattgaggaggtccaagaattggaagctaataaggaagctttcagtgcttcc
atcatttcttggaggagaacctgtctttcggcggcaagacttgctaggttttcgtatcaa
cgagccttgcacttgtgtccatggcaagcaaacatttatgcagatattgctgtaacttca
gatcttattacctcattggacaaggattatgaacgagacttagatgcatgtaggcagctg
ccagagaaaatgtgtgtgggagctttgctgcttgaaggtgacaattatgagttttgggtg
acattgggatgtttgtctgatcaaaatgcactaaatcaacatgctctaatcagaggattg
cagttgaatgtatctctagctgttgcttggggatatcttgggaagctttatagtaaaatg
agcaaaaagaaattggcacggcaaatgtttgatcgtgctagaagtattgatcctagcctt
gctttgccatgggcaagcatgtcagctgattgttgtgtgagggagtctgctcccgatgag
gcgtttgagagctgttcccaagcagtgcagatgatgcctttagctgaattccaaattggt
ctcactaagcttgctatgctgagtggccatctttcatctacacaggtttttggagctatt
cagcaagctgtgcagcgttctcctcactatcccgaatcacataatttacatggtctggtt
tgtgagtctcgaaaagattacagatctgctgctatttcttacaggatagccctccatgcc
attagcattgccttgttagataatcaaaactcacagataaaagatgtatcaattaatttg
gcgagatcactttgtaaggctgggaatgctgttgatgctatacaggaatgtgaaaatttg
aggaaagaaggaatgcttgacttcgaagtttttcaagtatatgcaatctcgttgtggcaa
cttggtaaaaatgatttagcactctcaatagtcagaagtcttgcagcaagtgtttcttct
atggaaaagacagccatggaaatctccgttagtttcatttttagattattatactacatc
agtggactagatgcagtcataaccaacattatgaaaatgccaaaggagcttattcaaagt
tcaaaagttaattttgttatgtctgctatcgatgctcttgatggacacaatcgtcttgga
tttcttgtctcaaggaacctatattttctcaacgatcatgatgaaattgacagggtgcac
tttctaatagcacttggtaaactggtgaaaaatgggcatgatggcttccttgcagttcag
agtggaattgcctacctcaaaaggattctgcacatgttccctaactgtagtttgataagg
aaccttgttggctatctctcactatctggtaaagagtcgaacagttgccatctggctaca
aggtgttgtaaactggaccatcttgacctttctgataaagaaggtttaaaatcagcttct
gatattcatggtgctgcagtagttgcctgctatgccaatgggaacagcaacccaaagtct
acttttcaaacttgtacaaatcagtgttctagaggtcctgcagcaatccgatacctgcag
agatactttcatcagaaaccatggaatcatgatgctcggtacttgcttattcttacctat
ttccagagggcacgtgaagagagatttcctcatcagctgtgtgttattctaaatcgtcta
atatgtgttgctctttcaaatgaattttgtggaaagaaagaaatgtgctatgaatataga
caatttcaacttctactttgtgcttctgagatcagtttacaatgcgggaatcacatcacc
tctatctcccatgcccaaaaggcctctgtactcgtgcttcctgataattatttgttcttt
gcccacctactattgtgccgtgtatatgccataaaaggtgatcttttgaattgtaagaaa
gagtatattcgatgcttggagttgaggacagattgccatattggttggatgtctctcaaa
cttatggaatgccattatcaattgcaaattgattcaaatgtcattgattcgaactttgaa
gaatgccttaaaaagggtgcaaattcatggaatatgtggatagctgtgtataacctggtg
aggggtttgatttcctttcatcagaaggatttaatctcagccgaagagctcatgcgagag
gcttgttcaatggcaggttttgaaagctgcctttttctatgtcatggtgctatctgcatg
gagcttgccaggcagtatggcggttcgatgctcctatcatgggctgttgatagtcttaac
agatttcatgagcttttgccaatctctttgcctcttgcctccttattggttgctcaagca
gaaggaagccttggtgcaaaagacaaatgggacagaagcattcgccttgaatggtattcc
tggccatcagtaatgaggcctgcagagctctactttcaaatgcatttggttgtaaggcag
ttaaaagatggacccaacgtcacaggtagattagagtcctctcatagtgcttggagatgg
gtaattcgggcaattcacatgaacccttcttgcatgagatattggaaggtcttacagaag
cttatgcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (33)   

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