KEGG   Aeromonas sp. ASNIH3: C2U39_02045
Entry
C2U39_02045       CDS       T05427                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
aea  Aeromonas sp. ASNIH3
Pathway
aea03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C2U39_02045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aea03400]
    C2U39_02045
DNA repair and recombination proteins [BR:aea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C2U39_02045
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C2U39_02045
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_23 AAA_25 AAA_21 DnaJ_CXXCXGXG nSTAND3 Viral_helicase1 NACHT cobW BCA_ABC_TP_C ScfRs Zn-ribbon_8
Other DBs
NCBI-ProteinID: AUV11084
UniProt: A0A2I8QYE6
Position
398239..401067
AA seq 942 aa
MEKIVIRGARTHNLKNINLILPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHAIPLAAQTISQMVDQVLAQPEGAKLMLLAPVVRNRKGEHTKLLENLAAQGYIRARID
GEVCDLSDPPALELHKKHTIEVVVDRFKVRDDLALRLAESFETALTLSGGIVLVVPMDGE
DGVAPMTFSANFACPECGYSMSELEPRIFSFNNPAGACPTCDGLGVQQYFDPAKLIHDPG
QSLAGGAIRGWDKRSFYYFQMLKSLADHYKFDLETPWEDLPLKTQEVILRGSGRTEIEFR
YMNDRGDVVVRKHPFEGILHNMERRYRETESNAVREELAKYIANKSCTSCGGSRLREEAR
HVFVDNRNLPAIAEQSIGDALAFFEGLNLSGQRAQIADKILKEIVERLGFLVNVGLNYLS
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGN
TVIVVEHDEDAIRLADHVLDIGPGAGVHGGAIVAQGTPEEIIANPESLTGDYLSGRKQIA
IPAERTPLTGKWLKLKGASGNNLRNVNLDLPIGVMTCVTGVSGSGKSTLINDTLFRIAHR
ELNKATESTPAPYRSVEGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQE
ARSRGYQPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKY
KGKNIHEILEMTVEDARAFFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRDTGQTLYILDEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVIKTADW
IVDLGPEGGAGGGRILVTGTPEEMSRCKESHTARFLAPLLEK
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggaaaaaatcgtgatccggggtgcccgcacccacaacctcaagaacatcaacctgatc
ctgccacgtgacaagctgatcgtggtcaccggcctgtccggttcgggcaaatcctccctg
gcgttcgataccctctatgccgaggggcagcgccgctatgtggagtccctctccgcctat
gcccgccagttcctctccctgatggagaagccggacgtggaccacatcgaggggctgtcg
cctgccatctccatcgagcagaagtccacctcccacaacccgcgctcgaccgtcggcacc
atcaccgagatttacgactacctgcggctgctgttcgcccgggtcggggagccacgctgc
ccgacccacgccattccgctcgcggcccagaccatcagccagatggtggatcaggtgctg
gcccagcccgaaggcgccaagctgatgctgctggcccccgtggtgcgcaaccgcaagggg
gagcacaccaagctgctggagaacctggcggctcagggttacatccgcgcccgcatcgac
ggcgaggtgtgcgatctgtcggatcctcccgccctggagctgcacaagaagcacaccatc
gaggtggtggtggatcgcttcaaggtgcgcgatgacctggccctgcgcctggccgaatcg
ttcgaaacggcgctgactctctccggcggcatcgtgctggtggtgccgatggacggggag
gatggggttgcccccatgaccttctccgccaacttcgcctgccccgagtgcggttactcc
atgtcggagctggagccccggatcttctccttcaacaacccggcgggggcctgtcccacc
tgtgacggtctcggggtgcagcagtatttcgatcccgccaagctcatccatgatccgggc
cagagcctggccggcggcgccatccgtggttgggacaagcgcagcttctactacttccag
atgctcaaatccctggccgatcactacaagttcgacctggagaccccctgggaggatctg
ccgctcaagacccaggaggtgatcctgcgcggctccgggcgcaccgagatcgagttccgc
tacatgaatgaccgcggcgacgtggtggtgcgcaagcacccgttcgaggggatcctgcac
aacatggagcgccgctaccgggagaccgaatccaacgcggtgcgggaagagctggccaaa
tacatcgccaacaagtcctgtaccagttgcggtggcagccgactgcgggaagaagcccgc
cacgtcttcgtggacaatcgcaacctgcccgccatcgccgagcaatccatcggcgatgcc
ctggccttcttcgaagggttgaacctgtccggtcagcgtgcccagatagcggacaagatc
ctcaaggagatcgtcgagcggctcggcttcctggtgaacgtcggcctcaactatctgagc
ctgtcgcgcagtgcagagaccctctccggtggcgaggcgcagcggatccggctggccagc
cagatcggggctggcctggtgggggtcatgtacgtgctggacgagccctccatcggtctg
catcagcgtgacaacgagcggctgctcaagaccctgactcacctgcgtgatctcggcaac
accgtgatcgtggtggagcacgatgaggatgccattcgcctcgccgaccatgtgctcgac
atcggcccgggggccggcgtgcacggcggtgccatcgttgcccaggggacgccggaggag
atcatcgcgaaccccgagtccctgaccggtgactacctctccgggcgcaagcagatcgcc
atcccggccgagcgcaccccgctcaccggcaagtggctgaaattgaaaggggctagcggc
aacaacctgcgcaacgtcaacctggatctgcccatcggagtgatgacctgcgtcaccggc
gtctccggttccggcaagtcgaccctgatcaacgacaccctgttccgcatcgcccaccgc
gagctcaacaaggccaccgagtccacacctgcgccctatcgcagcgtcgaggggctggag
catctggacaaggtggtggatatcgaccagagccccatcggccgcaccccgcgctccaac
ccggccacctacaccggactgttcaccccgatccgcgagctgctctccggcacccaggag
gcgcgttcccgtggctaccagccgggccgcttctccttcaacgtgaagggtgggcgctgc
gaggcgtgccagggggacggggtcatcaaggtggagatgcacttcctgccggacgtctac
gtgccgtgcgacgtctgcaagggcaagcgctacaaccgcgagaccctggaggtgaagtac
aagggcaagaacatccacgaaatcctcgagatgacggtggaagatgcccgtgccttcttc
gatcctgtgccggcggtggcgcgcaagctgcagaccctgatggacgtgggcctctcctac
atccggctcggtcagtccgccaccacgctctctggcggcgaggcgcagcgggtcaagctg
gcgcgggagctctccaagcgggacaccggccagaccctctacatcctggacgaaccgacc
accgggctgcacttccacgatatccagcagttgctcaaggtactgcaccagctgcgggat
cgcggcaacaccatcgtcatcatcgagcacaacctggacgtcatcaaaaccgccgactgg
atcgtcgatctgggcccggaagggggcgctggtggtggccgtattctggtgacgggtacg
cctgaggagatgagccgttgcaaggagtcccacacggcgcgcttcctcgctcctctactg
gagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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