KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105148550
Entry
105148550         CDS       T03917                                 
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105148550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aec03041]
    105148550
Enzymes [BR:aec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105148550
Spliceosome [BR:aec03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105148550
 Complex C
   U5 SnRNP specific factors
    105148550
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 AAA_19 AAA_16 HTH_61 nSTAND3 PhoH DnaB_C T2SSE
Other DBs
NCBI-GeneID: 105148550
NCBI-ProteinID: XP_011058642
UniProt: F4WS28
Position
Unknown
AA seq 2115 aa
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLDGTRMGDRAQRTK
PGKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEVLAVLKNDRLKEKEKKKETELLLGLLAEERFALLVNLGKKIT
DFGSDEKSTTNDENIDETYGINVQFEESSEEDDEDVYGEVRENEDEGDEGEEANDDRAIH
AENLGGTEEMKKEKPLHPLDIDAYWLQRRLSRIYDDAMVSQARAAEVLAVLKDAIDDREC
ENQLVLLLGYDCFDFIKQLKKYRHTVAYCTMLASSQSESERQKIRNKMNDDPVLAKILRQ
LDTGKGEDDADETMEARSQRKRREENEDTGGPGGQVQGTRNLIDLEDLIFAQGSHFMANK
RCQLPDGSFRKQRKGYEEVHVPALKPKPFADNEKLHPIEQLPKYVQPAFDGFKTLNRIQS
RLYQTALESDENLLLCAPTGAGKTNVALLCMMREIGRHINADGTINADEFKVIYVAPMRS
LVQEMVGNFRKRLSTYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFT
SLVRLIIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLR
IKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQVLIFVH
SRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNQELKDLLPYGFAIHH
AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELGA
LDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLISKMSDMLNAEVV
LGTIQNIRDAVTWLGYTYLYIRMLRCSNLYGISHDKLKQDPLLELHRADLIHSAAVGLDR
SGLIKYDRKSGNFQATELGRIASHYYCTHETMSTYNQLLKRTLSEIELFRVFSLSSEFKN
INVREEEKLELQKLMNVLLQAYISQLKLEGFALMSDMVFVTQSASRLMRAIFEIVLFRGW
AQLADKCLSICKMIDRRMWQSMSPLRQFRKMPEEIVKKIEKKNFPWERLYDLGPNEIGEL
IRVPKLGKTIHKYVHQFPKLGLSTHIQPITRSTLRVVLTITPDFQWDEKVHGMSEAFWIL
VEDVDSEVILHHEYFLLKAKYAADEHVIKFFVPVFEPLPPQYFLRVVSDRWIGAETQLPV
SFRHLILPEKNLPPTELLDLQALPITALRNAKFENIYSAFPQFNPIQTQVFNAIYNSDDN
VFVGAPTGSGKTTIAEFAVLRLLTQNPEGRCVYMVSKEALAELVYADWAAKFGQQLGRKV
VLLSGETGTDLKLLAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIGGEEGP
VLEVACSRARYISSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPTVRPVPLEL
HVQGINVTHNASRLAAMAKPVYNAILRHAAHKPVIVFVPTRRQARLTAIDLLTFTAAEGQ
PSRFFHAEEADIKPFLDRMSDKTLKETLSQGVAYLHEGLSADDRRLVEQLFDSGAIQVAV
ATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVLQMVARANRPLEDEDAKCVLL
CQSSKKDFFKKFLNEPLPVESHLDRRLHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRLT
QNPNYYGLQGVTHRHLSDHLSELVESTLTDLEQAKCVAVEDEMDTLPLNLGMIAAYYYIN
YATIELFSLSLNNKTKIRGLLEIISAAAEYESVPVRQREENLLRSLAARLPHAPQAARMA
DPHVKAQLLLQAHLSRIQLGPELQKDTELVLSKAVRLIQACVDVLSSSGWLAPAVAAMEL
AQMVTQAMWSKDSYLKQLPHFTAETIKRCTDKGVETVFDVMELEDDDRNRLLQLTDAQMA
DVAKFCNRYPNIEMSYEVQEKDKLHSGGTVNVIVQLEREDEVIGPVVAPFFPQKREEGWW
VVIGDPKSNSLLSIKRLTLQQKAKIKLDFVAPAPGQHSYTLYFMSDAYLGCDQEYKFIIN
VGEYESDASSGSDSD
NT seq 6348 nt   +upstreamnt  +downstreamnt
atggcggacgctgctgcacgtcaattacaatacgagtataaagcgaattccaatctcgtt
ttacaagctgatgtccgattaatagaaagacgcagccgagatgaagccaccggtgaggtt
atgtctcttgtgggaaaattggatggtactcgtatgggtgatagagcccagcgtaccaaa
cctggaaaagcagaagagagaaaagtcaaacgacaaaaacgtgatgaagcacaatatgac
ttcactcgtatgaaaggagcaaccttattatctgaaggtgtggatgaaatggttggtatt
gtatatcgtccaaaaacacaagagacacgtcaaacttacgaagtattactcagtttcata
caagaagctttgggtgaccaaccacgtgatattctttgcggtgcagctgacgaagtacta
gctgtattaaaaaatgatcgacttaaagagaaagaaaagaaaaaagaaactgaactttta
cttggtttattagcagaagaaagatttgcactgcttgtaaatcttggtaagaagattacg
gattttggtagcgacgaaaaaagtacaacaaacgatgaaaatattgacgaaacatatggg
atcaatgtacagtttgaagagagtagcgaagaagatgatgaagatgtatatggagaagta
cgagaaaatgaagatgaaggtgatgaaggtgaagaagctaatgatgacagagctattcat
gcagaaaacctgggtggaacagaagaaatgaagaaagaaaaaccattacatccattagac
attgatgcatattggttgcaaagaagattaagtaggatatatgatgatgccatggtatcg
caagcgagagctgctgaagtactagctgtcttgaaagatgccatagacgatcgtgaatgc
gaaaatcagcttgtgcttttattaggttatgattgctttgatttcattaaacagcttaaa
aaatacagacatacagttgcatactgtacgatgttagcctcatcgcagtccgaatcagaa
agacaaaaaatccgaaacaaaatgaatgatgacccagtgcttgccaaaatcttgcgccaa
ttagatacaggtaaaggtgaagatgacgctgatgagacaatggaagcgagatcccagcgc
aaaagacgagaagagaatgaggatactggaggacctggaggacaagttcaaggtacaaga
aacttgatagatttggaggatcttatatttgctcagggaagtcatttcatggctaacaag
cgttgccaattacctgacggaagtttccgaaaacagcggaaaggatatgaagaagttcac
gttcctgctttaaaaccgaaaccatttgcagataatgaaaaactgcatccaattgagcaa
ttacctaaatatgtgcaacctgcttttgatggtttcaagacgctaaatcgtatacaaagt
cgcttatatcagacagcattggagagcgatgagaatctactcctgtgtgctccaacagga
gctggtaaaaccaatgtagctttgctgtgcatgatgcgagaaattggaagacacataaac
gctgatggtacaatcaatgcagatgaattcaaagtaatttatgttgctccgatgcgttcg
ctggtgcaagaaatggtcggcaatttccgcaagcgattgtcaacatataatctgactgtt
tccgaattgacgggtgatcatcaattaacgcgagaacaaattgccgctactcaagttata
gtatgtaccccggaaaaatgggatattataacaagaaagggtggcgaaaaaactttcaca
tcattagtacgattgattattatcgacgagattcatttattgcatgatgaaagaggtcct
gttctggaagcattggtcgcaaggacgatacgaaacatcgaaactactcaagaagatgtg
cgtcttgttggtttatcggctacattacccaattaccaagacgttgcagcatttttgcgt
attaaaccggagacaggactattctattttgacaatagtttccggcctgtagctttagaa
cagcagtatattggcgttactgagaaaaaagcattgaagcgtttccaagtaatgaatgag
atcgtctatgaaaagaccatggaacacgctggcagaaatcaagtactaatatttgtacac
tcacgtaaggaaaccggaaaaacagcacgtgctattcgagacatgtgcctggagaaagat
actttaggtcaatttcttagggaaggttccgcgtcgatggaggttttaagaacagaagca
gagcaagtaaaaaatcaagagcttaaagatctgctaccatatggttttgcgattcatcac
gccggtatgactcgtgtggatcgtacgctagtggaggatctcttcgccgatagacacata
caagttctcgtatctacagcgactttagcttggggtgtcaatttgccggctcatacagtt
attatcaagggtactcaggtgtataacccggagaaaggtagatgggtagagctgggcgct
ttagacgtactgcaaatgttaggacgagccggtcgaccgcagtacgatactaaaggcgaa
ggtatccttatcacaaatcacagcgagctgcaatattatctgtcgcttttaaatcagcaa
ttacccattgaatcccaattaatcagtaagatgtccgatatgttgaatgcggaagtagtg
ctaggaacgattcagaatatcagagatgcagttacctggcttggctatacttatctttac
attagaatgcttcgttgttccaatctatatgggataagtcatgacaaattgaaacaagat
cctttattagagctccatagagctgatctaattcattcagctgcagtcggattggatcgt
agtggtttaatcaagtacgatcgcaaatctggcaattttcaggcgaccgaattgggtaga
atagcatctcattattattgcactcacgaaacgatgtctacatataatcagttgctaaag
cgcacgttgagcgagatagaattgttccgggtgttttcactctcgagcgagttcaaaaat
ataaatgtcagggaggaagaaaaactagagctgcaaaaactgatgaatgtgctattgcaa
gcatacatctcgcagttgaaacttgaaggattcgctcttatgtctgatatggtatttgtg
acgcaatccgcctcacgtctcatgagagctatctttgagatagttctgttccgtgggtgg
gcacaattagcagataaatgtctatctatctgtaagatgatcgatcgcaggatgtggcaa
tcaatgtcgccactcagacaattccgtaagatgccggaagagattgtgaagaagatcgag
aagaagaactttccatgggagaggctgtacgatctgggacccaatgagattggcgaattg
atccgcgtgccgaaactaggcaaaaccattcacaaatacgtccatcaatttccaaagcta
ggtttgtccacacatatccaaccgattacgcgttccactctaagagttgtgctgactatc
acaccggatttccaatgggatgagaaagttcacggtatgtcggaagcgttttggatctta
gtcgaagacgtagattcggaggtaattttgcatcacgaatatttcttattgaaggccaaa
tacgcagctgatgaacatgtaattaaattctttgtgccagtctttgagcctttgccacca
caatacttcttgcgcgttgtatccgatcggtggattggggcggagacacaattgcctgta
agctttcgacatctgatattgcctgaaaaaaatcttccgcctacggaattgctggatttg
caggcgctgccgataacagcgttgcgaaatgctaaattcgagaatatctattctgctttt
ccacagtttaatccaattcagacgcaagtattcaacgcaatttataattccgacgataat
gtatttgttggagcacccacaggttcaggaaaaacgaccattgcggaatttgcagtgcta
agattattgacgcagaatccagaaggacggtgtgtatatatggttagcaaagaggcttta
gctgaattggtctatgctgattgggcagcaaaatttggtcaacagttaggaagaaaagtt
gtcctattgagcggcgaaacaggaacggatttgaagctacttgccaaaggacagatcatt
atcaccacggcggataaatgggacgttttatcacgtagatggaagcaacgaaaaaatgtc
caaaacatccagctctttatcgtggatgaattgcagttgattggtggtgaagaaggccct
gtgctagaagttgcatgttcgcgagcacgttacatttcttcgcagcttgacaaacctact
agaataatagcattatcggcctcattagctgatgccaaagacgcagcacagtggttgggt
gcaccggcagctgcaacctttaattttcaccctactgtgcgaccagtacctttggaattg
cacgtgcaaggtataaatgtcacccataacgcgtcaagattagctgccatggcaaaacca
gtatataacgcaattcttcgacacgctgcacacaaaccggtgatcgtatttgtacccact
cgtcgacaagcgagattaacagccatcgacttgctgacattcacggcggctgagggtcaa
ccctcgagattctttcacgcggaagaggctgacattaaaccatttctcgatcgaatgagt
gacaaaacgctgaaggaaactttgtcgcaaggtgtagcttatcttcacgagggtttatcg
gccgacgatcgtcgtttagttgagcaattatttgacagtggagccatccaagttgcggtc
gccacgagggatctctgttggggtttatctatcagctcccatcttgtcgtagtcatggat
acacagtgctataatggcaagacacatgcctacgaggattatccaatcacagacgttctg
cagatggtagcgcgagctaatcgtccgttagaagatgaggacgccaaatgcgtactgttg
tgtcaaagctcaaaaaaagatttttttaagaagtttttgaatgaaccattaccggtagag
agtcacttggatcgccggttgcatgatcacttcaacgcggagattgtgacgaagacgatc
gagaacaaacaagacgcggttgattacctcacgtggactttcctgtatcgacgactcact
caaaatcctaattactatggcctgcaaggtgtcacacatcggcacctctcagatcatcta
tctgagctggtcgagagcacgttgactgatttagaacaagccaaatgtgtcgccgtggaa
gatgaaatggataccttgcctcttaaccttggaatgattgctgcttattactatatcaat
tacgctactatcgaattgttcagtctgtctcttaataacaagacgaagatcagaggtttg
ctagaaattatttcagcggctgctgagtatgagagcgttccagtgcgacaaagagaagaa
aatttactgagaagtttggctgcacgtttacctcatgctccacaagctgctagaatggcc
gatcctcatgtgaaggcgcaacttcttctgcaagctcatttatcgaggatacagttaggc
ccagaattacaaaaggatactgaactggtgttgagcaaggccgtaagattgatacaagct
tgtgtcgatgtcttgagttcttctggatggttagcacctgccgttgccgctatggaactt
gcgcagatggtgacgcaagcgatgtggtccaaagattcttatttgaaacaactgccgcat
tttacagcagagaccatcaagcgctgcaccgacaagggcgtggaaactgtatttgatgtc
atggaacttgaagatgacgatcgaaatcggttattacagttaacggatgcgcagatggca
gatgtggccaaattctgcaaccgatatcctaatattgagatgtcgtatgaagtacaggag
aaagacaaattgcacagtggcggcacggtaaatgtgattgtacaactggaacgggaagat
gaggtaatcgggccggtagtcgcgccgtttttcccgcaaaaacgtgaggaaggttggtgg
gtagtgattggcgacccgaagagcaactccttgctctctatcaaacgtttgacgttacaa
cagaaagcaaagatcaagttggattttgtcgctcctgcacccggtcagcattcctatact
ttgtactttatgagtgatgcttatcttggttgcgatcaagaatacaagtttatcatcaac
gtcggagaatacgaatcggatgctagttccggttcagattctgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

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