KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105149693
Entry
105149693         CDS       T03917                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018  RNA degradation
aec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105149693
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105149693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aec03019]
    105149693
   03041 Spliceosome [BR:aec03041]
    105149693
Messenger RNA biogenesis [BR:aec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105149693
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105149693
Spliceosome [BR:aec03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105149693
 Complex C
  U2 snRNP components
    105149693
SSDB
Motif
Pfam: LSM TIG_SUH divDNAB CwfJ_C_1
Other DBs
NCBI-GeneID: 105149693
NCBI-ProteinID: XP_011060579
Position
Unknown
AA seq 98 aa
MVEESEQLPPIDVKEPLDLIKLSLEERIYVKMRNERELRGKLHAFDQHLNMVLGDVEEII
NIVEIDEETYEEIYRQKKRTIQMLFVRGDGVILVSPPT
NT seq 297 nt   +upstreamnt  +downstreamnt
atggttgaggaatcagagcagttgccaccaatagatgtgaaggaaccattggatcttata
aagctaagcttggaggagaggatttatgtaaagatgagaaacgagagagaactccgagga
aagctacatgcctttgaccaacacttgaacatggtgctgggtgatgtagaagagatcata
aacatagtggagatcgatgaggaaacatacgaagagatttatcgccagaaaaagagaact
atccagatgctatttgtacgcggcgacggtgtcatcctagtatctccacccacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system