KEGG   Acinetobacter equi: AOY20_02000
Entry
AOY20_02000       CDS       T04103                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
aei  Acinetobacter equi
Pathway
aei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOY20_02000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aei03019]
    AOY20_02000
   03009 Ribosome biogenesis [BR:aei03009]
    AOY20_02000
Enzymes [BR:aei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     AOY20_02000
Messenger RNA biogenesis [BR:aei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AOY20_02000
Ribosome biogenesis [BR:aei03009]
 Prokaryotic type
  rRNA processing factors
   AOY20_02000
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ALH94415
UniProt: A0A0N9W090
Position
441349..444705
AA seq 1118 aa
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKETLASLNIPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWTQIQSTANSGPSPMLVHQEAGVVTRAIRDYLRDDVSEILIDSEQAYNEAYN
FVKAVMPRQLEKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNIEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVQVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRNSEKELGYESSEWHLDEEQTHQHTAQTNHDKGSKRQKSP
QQNAPVTAQKAPTVAAPSTSPCAWLENLFVQKQAATIDQSRTANNAAAAIEQMVNGGAVS
RGQFGQINQTQTIPNHTATQNNDANAYLAPSSVTQKPERDAAEKAEREEKRPAKKRNNNN
KHKEQREQNNQHDQQQNIVHEEIVQVSRQDQRQEARENKRNSRRQHQHDQHQETQQNHEQ
NSVPRRDRNNQQRPNRPNRQRDPSVLNEPVVATEVTAEAKQEQSVKQPQVELINAPKSEM
IPTALVVNVDQAKSEIVALNNNTHVVPQIAPTEAKVEAPVVAEKVQPQIEVVSKQDEQQN
IVQQPVKRASNDPRQRRREQRNAQAQPRTPKIAPSQVPTLGQYTVGSLIRHIYGDDCAVL
IEQFGLIPTFNRALQKFADQYSASVASAQQMPEEDKKPVTRDVEVTKAQLEAEPAPILDL
TPPKPVSEKRVANDPRERRRLAKLAAEQALVQAKQAHIEAEKVQTEAPQAEVEAVAVKET
SATNDVIVQETKTEEVTVEVKEEVIEISEPKTSTVATKTEAQKEETNNVSSEPIQADLVI
DNDQESTAESAEKPAKEKAVRPRRPRGRPPKKVDTATE
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgaaacgtatgttgattaatgcaacacatgccgaagaaattcgcgttgcacttgtcact
ggtcagcgtctttacgattttgatttagaaaaccgtacccgtgaacaaaaaaaatctaat
atttataaaggtcacgtgactcgcgttgaaccttctttagaagctgtattcgtcgaatac
ggagctggtcgccaaggcttcttatcaatgcgagaaatcgcaaactcttactacaaagca
gatcctcgccaaacttcaaacatcagagagctgattactgaaggcactgaacttttggtg
caagtagaaaaagaagaacgtggtaataaaggtgctgctctttcgacttttatctcttta
gctggtcgctatttagttcttatgccaaacaatccgaaaggtggtggtattagccgccaa
atttcaggatctgttcgtgaagagcttaaagaaactttagcttctttaaatattcctcgc
ggtatgagcgttattgtacgtactgctggtattggtcgctctcaagaagaattacaacta
gatttacaacacttgcttgatctttggacacaaattcaaagtactgcgaattctggccca
tctccaatgcttgttcatcaagaagctggcgttgtaacgcgtgctattcgtgattactta
cgtgacgatgtttcagaaattttaattgattctgagcaagcttataacgaagcatataac
tttgttaaagctgtaatgccacgtcaattagaaaaattaaaaacatatacattaaatgag
cctttatttgctcactttggtattgaaagccaaattcaaactgcttacgaacgtgaagtt
aaacttccttcaggtggttcaattgttattgaccaaaccgaagcattagtttctattgat
attaactctgcaaaatcaactcgtggtcatgacgttgaagaaactgcattaaatacaaac
atagaagctgcagaagaaattgctcgccaacttcgtctacgtgatattggtggtttggtt
gtaatcgacttcatcgatatgactaaagaccgtaaccaacgtatggttgaagcaaaactt
cgtgaagcaacacaaagcgatcgtgctcgtattcaattcggtcaattatctcgctttggt
ttaatggaaatgagccgtcaacgcttacgaccatctttagaagaagctactggttatgtt
tgccctcgctgtcatggtacaggtatggtgcgtgaccttcgctctctttctctttctatc
atgcgtaaagttgaagaaattgcacttcgcgaacgccatggtgaagttcaggttcaagtt
cctgtagaaattgcggcattcttattaaatgaaaagcgccatagtcttgtctacttagaa
caaacatcaaatgtacgtgtaactgtattacctcacccacatttagaaacgccacattac
gaaatttcttataacccagaaggttttgcaccaacaagttatgagcgtactgaagcgact
cgcaatagcgaaaaagaattaggttatgaatcatctgaatggcatttggatgaagagcaa
actcatcagcatactgctcagacaaaccatgacaaaggttcaaaaagacaaaagtctcca
caacaaaatgcacctgttacagctcaaaaagcacctactgtagcagcaccttcaactagc
ccatgtgcttggttagaaaatttatttgtacaaaagcaagctgcgactattgatcagtca
cgcacagcaaataatgctgcagctgcaattgaacaaatggttaatggtggtgctgtaagt
cgtggacagtttgggcaaattaaccaaactcaaactattccaaaccacacagcaactcaa
aataatgatgcaaatgcttatttagcaccatcttcagttactcaaaaacctgaacgtgat
gcagcagaaaaagcagagcgtgaagaaaagcgtcctgctaaaaagcgcaataacaacaat
aagcataaagagcaacgtgaacaaaataatcaacatgatcaacaacaaaatattgttcat
gaagaaattgttcaagtttctcgccaagatcaacgtcaagaagcacgtgaaaataaacgt
aattctcgtcgtcaacatcaacatgatcaacaccaagaaactcagcaaaatcatgagcaa
aactcggtgccacgtcgtgaccgcaacaaccaacaacgtccaaacagaccaaatcgccaa
cgtgatccaagtgtgttaaatgaacctgttgttgcaactgaagttactgctgaagcgaaa
caagagcaatcagtaaagcagcctcaagttgaattaatcaatgcaccaaaatcagaaatg
attccaactgcactggttgtaaatgttgatcaagcgaaaagtgaaattgttgcattaaat
aacaatactcatgtcgttcctcaaatcgcaccaacagaagcaaaagttgaagcgcctgtt
gtagcagaaaaagtacagccacaaattgaggttgtatcaaagcaagatgaacaacaaaat
attgttcagcaacctgttaaacgtgcaagcaacgatcctcgccaacgtcgtcgtgaacaa
cgcaatgcgcaagcacagcctcgtacacctaaaattgcaccttctcaagtgccaacatta
ggtcaatatacggtgggcagtttaattcgccatatttatggtgatgattgtgctgtatta
attgaacagtttggacttattccaacattcaatcgcgcattacaaaaatttgcagatcaa
tacagtgcttctgtcgcttcagcacaacaaatgcctgaagaagacaaaaaacctgttaca
cgtgatgtggaagtaaccaaggctcaattagaagcagaacctgctcctattttagactta
acaccaccaaaacctgtatcagaaaaacgtgttgcaaatgatcctcgtgaacgtcgtcgt
ttagctaaacttgcagcagagcaagcattagttcaagcgaaacaagcacacattgaagca
gagaaagttcaaactgaagcgcctcaagctgaagtagaagcagtcgctgttaaagaaaca
tcagcaacaaatgatgttatcgtgcaagagactaaaacagaagaagtgactgtagaagtt
aaagaagaagttattgaaatttctgaacctaaaacttcaacagttgcaactaaaactgaa
gctcaaaaagaagaaacaaataatgtttctagcgagcccatccaagctgacttagtgatc
gataatgatcaagagtcaactgctgaatcagctgaaaaaccagcaaaagaaaaagcagtt
cgacctcgtcgtcctcgtggacgtccaccgaaaaaagtggacactgcaactgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system