KEGG   Aeromonas encheleia: NCTC12917_00035
Entry
NCTC12917_00035   CDS       T06531                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ael  Aeromonas encheleia
Pathway
ael03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ael00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCTC12917_00035 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ael03021]
    NCTC12917_00035 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ael03400]
    NCTC12917_00035 (rpoZ)
Enzymes [BR:ael01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NCTC12917_00035 (rpoZ)
Transcription machinery [BR:ael03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NCTC12917_00035 (rpoZ)
DNA repair and recombination proteins [BR:ael03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NCTC12917_00035 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: VEG94571
UniProt: A0A448KQN2
Position
1:complement(37643..37918)
AA seq 91 aa
MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEENDKPTVIALREIELGLVN
NQVMDTQDRYEQQEQEAAELAAVAAIAEGRG
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgttactgtagaagatgctgtaaaacaggtaggtaaccgttttgacctggtg
ctggtcgccgcgcgccgcgcccgtcaaatcgcggtacaaggtaaagatcccctggtcgac
gaagagaacgacaagccgaccgtgatcgccctgcgcgagatcgagctgggtctggtgaac
aatcaagtgatggacacccaggaccgctacgagcagcaagagcaggaagccgccgagctg
gctgccgttgctgccatcgccgaaggccgcggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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