KEGG   Aeromicrobium erythreum: AERYTH_09515
Entry
AERYTH_09515      CDS       T04236                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aer  Aeromicrobium erythreum
Pathway
aer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AERYTH_09515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aer03400]
    AERYTH_09515
DNA repair and recombination proteins [BR:aer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AERYTH_09515
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AERYTH_09515
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_16 AAA_5 HAMP nSTAND3 AAA AAA_28 P-loop_SecA SRP54 AAA_7 AAA_6
Other DBs
NCBI-ProteinID: ALX04919
UniProt: A0A0U3TH47
Position
complement(2014746..2016830)
AA seq 694 aa
MRPLSELRRQVAPFTVVSEYQPAGDQPAAIQALQERIEGGEQDVVLMGATGTGKTATTAW
LAERLQRPMLVMLPNKTLAAQFANELRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATWSLLTRRDVIVVATVSCIYGLGSAQEYMERMIRFKVGDEKPREE
LLRTLVQAQYVRNDVAPTRGTFRVKGDTLEIFPVYQEMAVRIEFFGDEIERLMTLHPLTG
EVISEDTELAVGAATHYAVGPDIMTRAIESIEIELKDRLAELEAQGSLLEAQRLRMRTTY
DIEMMQQVGTCSGIENYSRHMDGRAPGSAPNCLLDYFPEDFVLVLDESHVTVPQIGAMYE
GDMSRKRTLVEHGFRLPSAMDNRPLTWSEFLERIGQTVYLSATPGNYEMEKTGGEVVEQI
IRPTGLVDPEVLVKPTRGQIDDLVAQIRDRVEKNERVLVTTLTKKMSEDLTDYLLEAGIR
TRYLHSEVDTLRRVELLRELRMGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSG
RSLIQTIGRAARNVSGQVIMYADRITDSMALAIDETNRRRERQVAYNTERGIDPQPLRKK
IGDITDLLAREDADTTKLLAATGDHKRRGAPVPLGQHTADLADLPSADLAALIEQLSEQM
HTAAADLQFEVAARLRDEIGELKKELRGMLEAHA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgaggcccttgtccgagctgcgccgccaggtcgcccccttcaccgtcgtctccgagtac
cagcccgcgggcgaccagcctgccgccatccaggcgctgcaggagcggatcgagggcggc
gagcaggacgtcgtgctcatgggtgcgaccggtacgggcaagacggccacgacggcctgg
ctcgccgagcggctccagcgacccatgctcgtgatgctgccgaacaagacgctggccgcc
cagttcgcgaacgagctgcgcgagctgctccccaacaacgccgtggagtacttcgtctcc
tactacgactactaccagcccgaggcgtacgtcccgcagagcgacacctacatcgagaag
gactcctcgatcaacgaggaggtcgagcggctgcgccacagcgccacctggtcgctgctc
acccgacgcgacgtgatcgtcgtcgcgaccgtctcgtgcatctacggcctcggctcggcg
caggagtacatggagcggatgatccgcttcaaggtcggcgacgagaagccacgcgaggag
ctcctgcgcacgctcgtgcaggcccagtacgtccgcaacgacgtcgcgccgacccgcggc
accttccgggtcaagggcgacacgctcgagatcttcccggtctaccaggagatggccgtc
cgcatcgagttcttcggcgacgagatcgagcggctcatgacgctgcacccgctcaccggc
gaggtgatcagcgaggacaccgagctggccgtcggcgcagcaacccactacgccgtcggg
cccgacatcatgactcgggccatcgagagcatcgagatcgagctcaaggaccggctggcc
gagctcgaggcgcagggcagcctgctcgaggcacagcggctgcgcatgcgcaccacctac
gacatcgagatgatgcagcaggtcggcacctgctccggcatcgagaactactcgcgccac
atggacggtcgtgcaccgggctcggcgcccaactgcctgctcgactacttcccggaggac
ttcgtgctcgtcctcgacgagtcgcacgtgacggtgccgcagatcggcgccatgtacgag
ggcgacatgtcgcgcaagcgcacgctcgtcgagcacggcttccggctgcccagcgccatg
gacaaccgtccgctcacgtggagcgagttcctcgagcgcatcggccagaccgtctacctc
tcggccacgccgggcaactacgagatggagaagaccggcggcgaggtggtcgagcagatc
atccgtcccaccggcctcgtcgaccccgaggtgctggtcaagcccacgcggggccagatc
gacgacctcgtggcgcagatccgcgaccgggtcgagaagaacgagcgggtgctcgtcacc
accctcacgaagaagatgtccgaggacctcaccgactacctgctcgaggccggcatccgc
acgcgctacctgcacagcgaggtcgacacgctgcgtcgcgtcgagctgctgcgcgagctg
cgcatgggcgagtacgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgacctg
cccgaggtgagcctggtggcgatcctcgacgccgacaaggagggcttcctgcgctccgga
cgctcgctcatccagacgatcggtcgcgccgcccgcaacgtgtcgggccaggtgatcatg
tacgccgaccggatcacggactcgatggcgctggccatcgacgagacgaaccgacggcgc
gagcggcaggtcgcctacaacaccgagcgcggcatcgatccccagcccctgcgcaagaag
atcggcgacatcaccgatctcctggcccgcgaggacgccgacacgaccaagctgctcgcc
gccaccggcgaccacaagcgtcgcggtgcgcccgtgccgctcggccagcacacggccgac
ctcgccgacctgccctcggccgacctcgccgcgctcatcgagcagctgagcgagcagatg
cacacggccgcggccgacctgcagttcgaggtcgcggcgcggctgcgcgacgagatcggg
gagctcaagaaggagctgcgcggcatgctcgaggcgcacgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system