KEGG   Actinobacillus equuli subsp. equuli: ACEE_07770
Entry
ACEE_07770        CDS       T03501                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
aeu  Actinobacillus equuli subsp. equuli
Pathway
aeu02024  Quorum sensing
aeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACEE_07770
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACEE_07770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aeu03019]
    ACEE_07770
   03036 Chromosome and associated proteins [BR:aeu03036]
    ACEE_07770
Messenger RNA biogenesis [BR:aeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ACEE_07770
Chromosome and associated proteins [BR:aeu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ACEE_07770
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AIZ79665
Position
complement(1665151..1665429)
AA seq 92 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARSVSHNNGGSSHAQQAQAVEAPADKAE
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcaaaaggtcaatctctacaagatccatatttgaatgcacttcgtcgtgagcgcatt
cctgtttcaatttatttagttaacggcattaaattacaaggtcaaattgaatctttcgat
caattcgtaattttattgaaaaataccgtgagccaaatggtttataaacatgcaatttca
actgtagttcctgctcgttcagtttctcataacaacggtggttcttcacacgctcaacaa
gctcaagcagttgaagctccagcagacaaagcggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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