KEGG T05794: EI546

Aequorivita sp. H23M31: EI546_13355

Entry

EI546_13355       CDS       T05794

Name

(GenBank) RtcB family protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

aev Aequorivita sp. H23M31

Brite

KEGG Orthology (KO) [BR:aev00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aev03016]
    EI546_13355
Enzymes [BR:aev01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     EI546_13355
Transfer RNA biogenesis [BR:aev03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    EI546_13355
Prokaryotic type
   tRNA splicing ligases
    EI546_13355

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

QAA82644

UniProt:

A0A410G5R7

Position

3038563..3039717

AA seq 384 aa
MIQKIETEKIPIKLWLDDIEDGALQQAKDLANLDIAFRHIAIMPDSHQGYGMPIGGILAT
KDAIIPNAVGVDIGCGMCSLRTNLETIEMDELKNIMGQIRETVPVGFKHHDEKQDERWMP
DLKEDLPIVSKEYERGRNQVGTLGGGNHFMEIQKGSDGYIWIMVHSGSRNIGYTVANHYH
KKAVVETKKRGDDVPKDLSYFVRGTEDYDNYYKEMNYCIEFALQNRKLMMERIKDAFKEF
VPEVEFSNFINKPHNFAAWETHFGGKVMVHRKGATRAEKGEWGMIPGSQGTSSFLVKGKG
NPLSFNSCSHGAGRLMSRSEARRSLDLKKEVAQLKEKGVLHALRHKKDLDEAPSSYKNIN
EVMALQKDLVEIQVELTPLAVVKG

NT seq 1155 nt +upstreamnt +downstreamnt
atgatacaaaaaatcgaaacagagaaaattcccatcaaattgtggttggacgatattgag
gatggtgctttgcaacaggccaaggatttggccaatttggatattgcatttagacatatt
gccattatgccggattctcatcagggatatggcatgcccattggtgggattctcgcaacc
aaggatgccattattcccaatgccgtaggggttgatatcggttgtggcatgtgttcctta
cgcacaaatcttgaaacgattgaaatggatgaacttaaaaatatcatgggtcagattcga
gaaacggttcccgtgggatttaagcaccacgatgagaaacaggatgaaagatggatgccg
gatttaaaagaggatttgccaattgtaagcaaagaatatgagcgtggaagaaaccaagta
ggaacgctaggtggagggaaccattttatggagatccaaaaaggatccgatggctatatt
tggattatggtgcattcgggttctcggaatattggttataccgtggcaaaccattaccat
aaaaaggctgtagtggaaacaaaaaaacgcggcgatgacgttccaaaggacctttcctat
tttgtacgcggaactgaggattacgacaattattataaggaaatgaattactgcatcgag
tttgcccttcaaaacagaaaactgatgatggaaagaataaaggacgcttttaaggagttt
gtgcctgaggttgagttttcgaattttataaataaacctcataattttgcggcatgggaa
acccatttcggcggaaaagtaatggtccatagaaaaggtgccacccgtgccgaaaaaggg
gagtgggggatgattcctggatcgcaagggaccagctcatttttggtaaaaggaaaagga
aatcccctgtccttcaattcctgttcgcatggagcgggcagattaatgagccgctccgaa
gccagacggagccttgatttgaaaaaggaagtagcccaattaaaggagaaaggagtgctg
catgcacttcggcataaaaaagatttggatgaagcacccagttcctataaaaacataaat
gaggtaatggctcttcagaaagatttggtggagatacaggtggaactaacgcctttggcc
gtggtcaagggttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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