KEGG   Actinopolyspora erythraea: CDG81_14990
Entry
CDG81_14990       CDS       T05020                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
aey  Actinopolyspora erythraea
Pathway
aey03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aey00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CDG81_14990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aey03021]
    CDG81_14990
   03400 DNA repair and recombination proteins [BR:aey03400]
    CDG81_14990
Enzymes [BR:aey01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CDG81_14990
Transcription machinery [BR:aey03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CDG81_14990
DNA repair and recombination proteins [BR:aey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CDG81_14990
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ASU79375
UniProt: A0A223RU62
Position
complement(3448605..3448922)
AA seq 105 aa
MSIPNSLTAFPGGQSSNTKSQPSGGVAEGITDPPIDDLLDNVSSKYALAIFAAKRARQIQ
DYYAQLGEGLLEYVGPLVEPGPREKPLSIALREIHAGVLQHSEGA
NT seq 318 nt   +upstreamnt  +downstreamnt
gtgagcatccccaactcgctgaccgcctttcccggcggccagtcttccaacaccaagtcc
cagccgagcggtggcgtggccgaggggatcacggatccgcccatcgacgatctgctggac
aacgtcagctcgaagtacgcgctggccatcttcgccgccaagcgggcgaggcagatccag
gactactacgcccagctcggcgagggactgctggagtacgtgggcccgctggtcgagccg
gggccgcgtgagaagccgctgtccatcgcgctccgcgagatccacgcgggcgtgctgcag
cactccgagggcgcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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