KEGG   Alcaligenes faecalis ZD02: UZ73_17035
Entry
UZ73_17035        CDS       T04157                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
afa  Alcaligenes faecalis ZD02
Pathway
afa03410  Base excision repair
afa03430  Mismatch repair
afa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:afa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UZ73_17035
   03430 Mismatch repair
    UZ73_17035
   03440 Homologous recombination
    UZ73_17035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afa03400]
    UZ73_17035
DNA repair and recombination proteins [BR:afa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     UZ73_17035
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UZ73_17035
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UZ73_17035
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB VRP3 Cwf_Cwc_15
Other DBs
NCBI-ProteinID: ALO39819
Position
complement(3769081..3770790)
AA seq 569 aa
MVTPILKNRPAQEAASNALKQAGIHDLMARLLASRGVTDATQIDPAWRNMIPPNMLTQAR
EAAILLADAIARRDRMLIIADYDCDGATACAVGLRALRSMGAVVDFLVPNRFETGYGLSP
AVVELAEQHPSGKPDLLITVDNGIASIDGVEAAHMAGMKVLVTDHHLPGDELPDALAIVN
PNQPGCEFPSKNLAGVGVIFYLMLALRAELRQRGVYEANAGPRLNELADLVALGTVADVV
SLDANNRLIVTQGLERMRKGQMQAGLRALFQVAGRDPRQASAFDLGFALGPRINAAGRLA
DMALGIRCLITDDEDEAANLARELEDMNQDRRSIEQSMREEALRAAELAEPDTSATVCVF
HPEWHQGIVGLVASRLKEKYWRPTLAFAQGDEGEIKGSGRSIPDVHLRDALDLVSKRYPG
LILKFGGHAMAAGLTIEEDNYDVFVQAFEEAVQELTGRYQFDPIIETDGSLEPEHINITV
AGLLQKQVWGAGFPAPVFRDNFFVRQQRLLKNKHLKLSLERNGEYFDAIWFNRDTLLPEN
IEAAYRLDQNEWNGNVSVQFIIEYAQGQD
NT seq 1710 nt   +upstreamnt  +downstreamnt
gtggtcacccctatcctgaaaaaccgtcccgctcaagaagctgccagcaacgccctgaaa
caggccgggattcacgacttaatggcccgtctgctggcctcccggggtgtgaccgatgcc
acccagatcgatccggcctggcgcaacatgattccgcccaatatgctgacccaggcgcgt
gaagccgccatcttgctggccgatgccattgcccgccgggatcgcatgctgatcattgcc
gactacgactgtgacggcgctaccgcctgtgcagtcggcctgcgcgcgctgcgcagcatg
ggggctgtcgtggattttctggttccaaaccgttttgaaaccggctatggcctgtcaccc
gccgtggtcgaactggcagaacaacacccttcgggcaagccggatctgctgattaccgtg
gataacggcattgccagtattgatggcgtggaagccgcccatatggcgggcatgaaggtt
ctggtcacagatcaccacttgcccggcgatgaattgcccgatgccctggcgattgtgaac
cccaatcagcccggctgtgagttcccctccaagaacctggccggtgtgggcgttattttt
tacctgatgctggctttgcgtgccgagctgcgacaacgcggagtgtatgaagccaatgca
ggcccacgcctgaacgagctggccgatctggtcgccctgggcaccgtggccgacgtggtc
agcctggatgccaacaaccgcctgatcgtcacccaaggcctggagcgcatgcgcaagggc
cagatgcaagccggactgcgcgccctgttccaggttgcaggccgcgatccccgtcaggcc
agtgcctttgatctgggttttgccctggggccacgcatcaacgccgccggtcgactggcc
gatatggccttggggatacgctgcctgatcacggatgatgaagacgaagccgcgaatttg
gcccgcgaactggaggacatgaaccaggatcgccgctcgattgagcagtccatgcgcgaa
gaggccctgcgcgcggccgaactggctgaaccggacaccagcgccaccgtgtgcgtgttt
cacccggaatggcaccaaggcatcgtcggactggtcgcctcacgtctgaaagaaaagtac
tggcgccctaccctggcctttgcccagggtgacgaaggcgagatcaaaggttcgggccgt
tctattcccgacgtgcacctgcgcgatgcgctggacctggtgtccaaacgctatcccggc
ctgattctgaagtttggtggccacgccatggcagccggcctgacgatcgaagaagacaat
tacgatgtatttgtgcaggcttttgaggaagccgtgcaggaactgacgggccgctatcag
tttgaccccatcatcgaaaccgacgggtcattggagcctgagcacatcaatattacggtg
gccgggctgctgcaaaaacaagtctggggcgccggcttcccggctcctgttttccgcgac
aacttcttcgtgcgccaacaacgcctgctcaagaacaagcatttaaagttgagcctggag
cgcaacggcgaatacttcgacgcaatctggttcaaccgcgataccttgttgcctgaaaat
atcgaagccgcctatcgcctggatcagaacgaatggaatgggaacgtcagcgtgcaattc
attattgaatatgcacagggtcaggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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