KEGG   Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0473
Entry
Lferr_0473        CDS       T00758                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
afe  Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe00740  Riboflavin metabolism
afe01100  Metabolic pathways
afe01110  Biosynthesis of secondary metabolites
afe01240  Biosynthesis of cofactors
afe02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:afe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Lferr_0473
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lferr_0473
Enzymes [BR:afe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Lferr_0473
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Lferr_0473
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACH82727
Position
445532..446605
AA seq 357 aa
MSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGEPHAEVLALKEAGAAARGA
TAYVTLEPCSHYGRTPPCADALIAAGIARVVIAMRDPNPLVAGRGVERLRAAGVVAEEGC
LEAAAEALNPGFLRRMRHGRPWLRLKQAMSLDGRVALANGRSQWLTGEAARADVQQERAR
ASAILVGIGTVLADNPRLAPRLEAPLRRYPVKVIMDSHLRTPPDAALFGTPGAVWIFHGQ
DAPVAARAALCAAGAELLFCRGTVQGLDWQEVMGMLAERQINEVLVEAGPGVAASLFAAG
LIDEWLLYVAPLLLGLDARPVLATGPYSDLAEVPRWSVIQSSRLGNDIKWTLRPQER
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgagtgaggctctggtgcttgcggaacagggcctgtacagcgcgcaccccaatccctgt
gttggggctgttctggtgaaagatggacgcgtcatcgggcggggtgctcatctgcaagcc
ggtgagccgcatgcggaggttctcgcgctgaaggaggcgggtgctgctgcgcgcggcgct
acggcttatgtgactctggagccttgcagtcactatggccgtacgccgccctgtgcagat
gcgctgattgccgcgggtatcgcgcgggtggtgattgccatgcgcgaccccaaccctctg
gtggcggggcgcggcgtggaacgtctgcgcgccgccggcgtggtggccgaggagggttgc
ctggaagcggcggcagaagccttgaatcctggatttctgcgacggatgcgccacggccgc
ccctggctgcggctcaagcaggccatgagtctggatggccgggtggcgctcgccaacggg
cgaagccaatggctgacgggggaggcggcgcgtgcggatgtgcagcaggagcgggcgcgc
gccagtgccatccttgtcggcatcggcacggtgctggccgataatccgcgcctcgcacca
cgcctggaagctcccctgcggcgctatccggtgaaagtcatcatggacagccatctgcgc
acgccgccggatgcggcgctttttggtacacctggtgcggtatggatttttcatgggcag
gatgctcctgttgccgcccgggcggcgctatgcgctgccggtgcggagttgctgttctgt
cgcggcacggtacagggactggactggcaggaagtgatgggcatgctggcagagcggcag
atcaacgaggtgctggtcgaagcggggcctggcgtcgctgcttccctgttcgccgctggc
ctgatcgacgaatggctgctttatgtggccccgctgctgctcgggctggatgcacggcca
gtgctcgccaccggcccctattcggatctcgcggaggtgccgcgctggtcggtgatccaa
agctcccgattgggcaacgatatcaagtggacattgcgtccacaggagcgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system