KEGG   Alysiella filiformis: H3L97_00125
Entry
H3L97_00125       CDS       T06725                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
aff  Alysiella filiformis
Pathway
aff03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aff00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H3L97_00125 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aff03019]
    H3L97_00125 (pcnB)
Enzymes [BR:aff01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     H3L97_00125 (pcnB)
Messenger RNA biogenesis [BR:aff03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     H3L97_00125 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd Halo_GVPC
Other DBs
NCBI-ProteinID: QMT32390
Position
complement(15666..16997)
AA seq 443 aa
MLKKIIGNVLNKRRAKKLKIACQYHNLHLPAEHTPAAHVIRELTSHGYEAYLVGGAVRDF
LLHVAPKDFDVATNATPEQVCKLFRRSRVIGKRFPIAHVMVGRDTVEVSTFRSGVARQNE
AGRIVKDNAYGTIEQDAVRRDFTCNALYYDMNKKQVIDFHNGMDDIQQKRLVMIGEPVAR
YQEDPVRMLRAVRLAGKLDFVIDETTAAPIAEQAHLLQKEPVARLFDELVKIIVSGHAQG
CLQQLRHLGVDASDIHPLLFALQNAPRHGVIEQALLGTDKRVRAGQSVSVGFVLAALMWD
KILPNYQQNQSNGASEVNAMLAAISAFRDEMERGWGVPQTMSATMREIWALQPHFLYLRG
KRPFKLLSNPRFRAAYDFLLIRAKVGEVESALADWWTKFQYAKDDVRNEMAYSDSLKIQG
EATAPKKKRRKPRKKANAKSVGE
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttgaaaaaaatcattggcaatgtgttgaacaaacgccgtgccaaaaaactcaaaatt
gcttgccaataccacaatttgcatttgcctgccgaacacacgcctgctgcccatgtgatt
cgtgagctgacatcgcatggctatgaagcctatttggtgggcggtgcggtgcgcgatttt
ttgctccacgttgcgcccaaagattttgacgtggcaaccaatgccacgcccgagcaggtg
tgcaaattgtttcgccgcagccgtgtgattggcaagcgttttccgattgcgcatgtgatg
gtggggcgcgatacggtggaagtcagcacctttcgcagtggcgtggcgcgacaaaacgag
gcagggcgcattgtgaaagacaatgcctatggcacgattgagcaagatgcggtgcgccgc
gatttcacttgcaatgctttgtattatgatatgaataaaaagcaagtgattgatttccat
aatggtatggacgatattcaacaaaaacgcttggtgatgattggcgaacctgtggcgcgt
tatcaggaagaccctgtgcgtatgctccgcgcggtgcgtttggcgggcaaattggatttt
gtgatagacgaaaccaccgcagcacccattgccgagcaagcccatttgttgcaaaaagaa
cctgttgcgcgtttgtttgatgagttggtcaaaatcatcgtgtcgggacacgcgcaaggc
tgcctgcaacaattacggcatttgggcgtggacgcgagcgacattcaccccctgcttttt
gcgttgcaaaatgcgccccgtcatggcgtgatagaacaggctttgttgggaaccgacaag
cgcgtgcgtgcagggcagagtgtgtcggtgggatttgtgttggcggctttgatgtgggat
aaaattttacccaattatcaacaaaatcaatcaaatggtgccagtgaggtcaatgcgatg
ttggctgccatttctgcttttcgtgatgaaatggagcgcggctggggtgtgcctcaaacc
atgtcggcaaccatgcgtgaaatttgggcgttgcagccgcattttttgtatttgcgtggc
aagcgtccgtttaaattgttgagcaatccgcgttttcgtgcggcgtatgattttttgttg
attcgcgccaaagtgggcgaagtggaatcggcattggcagattggtggacaaaatttcaa
tatgccaaagacgatgttcgcaacgaaatggcgtattcagacagcctgaaaattcaaggc
gaggccaccgcacccaaaaagaaacgccgcaagccgcgtaaaaaggcgaatgccaaaagt
gtgggggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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