KEGG   Acidithiobacillus ferrivorans: Acife_0862
Entry
Acife_0862        CDS       T01595                                 
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
afi  Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:afi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afi03021]
    Acife_0862
Transcription machinery [BR:afi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Acife_0862
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AEM47044
UniProt: G0JML5
Position
879093..880034
AA seq 313 aa
MKSASRDEEENVQAVASEKAADVSEKAEGIEDFGEAHDWDATRCYLREIGHSPLLTAEQE
VTLGRRVQAGDQAARCTMIESNLRLVVKVARRYINRGLPLLDLIEEGNLGLIRAVEKFDP
ERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHIMKELSTVLRAVRCLGQTLQRDPTPE
EVAEALNRPVEAVRGCLEMDGRVTSLDVPHGRDSDRPLADIIADVDALGVEADLADRDLS
QQVHQWIATMTEKHRLVLFWRFGLDGTDGATLEEVGSRLGVTRERVRQIQVEALLVLRQR
IEEEGLTSESLFG
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaaagcgcgagcagagacgaggaagagaacgttcaggcagtagcttcggagaaggca
gcggatgtttcggaaaaagccgaagggatagaagattttggtgaggcccatgattgggat
gctacccgctgttatctgcgggaaatcgggcatagtccgctgctgaccgcagaacaggag
gtcaccctcgggcgccgggttcaggccggagatcaggcggcacgctgcaccatgatagag
agtaacctgcgtctggtggtaaaggtggcgcggcgttatatcaaccggggtttgccactc
ctggatctgatcgaagagggtaatctcgggctgatccgggcggtggagaagttcgatcca
gagcgcggctttcgcttctccacctacgcgacctggtggattcgccagaatatcgagcgc
gcgctgatgaatcagactcgcaccatccgcctgcccatccacatcatgaaggaactcagc
actgtgctgcgcgcggtccgctgtctcgggcaaaccctgcaacgagacccgacgccggag
gaggtggcagaggcgctcaaccgcccggtagaagcagtgcgtggctgtctggaaatggat
ggtcgagtgacgagcctggatgtgccccatggccgggattcggaccgacccctggcggat
atcattgccgatgttgatgcgctgggggttgaagcggatctggctgaccgggatctctcc
cagcaggtgcaccagtggattgcaaccatgaccgagaagcatcggctggtattgttctgg
cgcttcggtctggacggtaccgatggggcgacgctggaagaggtcggctctcgcctcggc
gttacccgggagcgggtgcggcagattcaggtagaggcattgctggtgctgcgccagcgc
attgaagaggaaggcctgacatcggagagccttttcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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