KEGG   Acidithiobacillus ferridurans: AFERRID_03950
Entry
AFERRID_03950     CDS       T05847                                 
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
afj  Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:afj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afj03019]
    AFERRID_03950
   03009 Ribosome biogenesis [BR:afj03009]
    AFERRID_03950
Messenger RNA biogenesis [BR:afj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AFERRID_03950
Ribosome biogenesis [BR:afj03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AFERRID_03950
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ead_Ea22
Other DBs
NCBI-ProteinID: BBF64177
UniProt: A0A2Z6IHU6
Position
400340..400924
AA seq 194 aa
MDPKAHRLVWIDLEMTGLQPEQDQILEIATLVTDDSLRILCEGPVLAVHQPEFVLAALDD
WNQRTHSTSGLLQRVRDSRLDMAAAETQTLDFLHQHVTTGTSPICGNSVCQDRRFLARLM
PRLERFFHYRMIDVSTVKELATRWYPHLPRFSKAERHEALADIRESVAELTYYRERLFPQ
TPFPGSGAGNSATE
NT seq 585 nt   +upstreamnt  +downstreamnt
atggaccccaaagcacaccgcctcgtctggatcgatctggagatgacaggtctgcagccg
gaacaggatcagattttggaaatcgccacgctggtcacggacgatagtctgaggattctc
tgcgaagggccggtattggccgtccatcaaccggaattcgtgctcgcggctctggatgac
tggaaccagcgtacccacagcacttcgggcctcctgcagcgggtccgcgacagccgcctg
gatatggccgccgcagaaacccaaaccctggacttcctgcaccagcatgttaccaccggc
acatcaccgatttgcggcaacagcgtatgtcaggatcgccgatttttagcccgcctgatg
ccgcggctggaacgtttttttcactatcggatgatcgatgtgagcaccgtcaaggaactc
gccacccgctggtatccgcacctgcccagattttccaaggccgagcgccacgaagcgctg
gccgacattcgcgaatctgttgccgaactgacttattatcgcgaacgacttttcccgcag
acaccttttccaggctctggggctggaaactccgccactgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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