KEGG   Anoxybacillus flavithermus: Aflv_0132
Entry
Aflv_0132         CDS       T00790                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
afl  Anoxybacillus flavithermus
Pathway
afl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:afl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Aflv_0132 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afl03021]
    Aflv_0132 (rpoA)
   03400 DNA repair and recombination proteins [BR:afl03400]
    Aflv_0132 (rpoA)
Enzymes [BR:afl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Aflv_0132 (rpoA)
Transcription machinery [BR:afl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Aflv_0132 (rpoA)
DNA repair and recombination proteins [BR:afl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Aflv_0132 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L PASTA SpoIVA_ATPase HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: ACJ32516
UniProt: B7GJ94
Position
133850..134794
AA seq 314 aa
MLEIEKPKIETVEISEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTTIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLQIATLAKDGRLRMRMTAKRGRGYTPADANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQMTNYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVNLTDEAQHAEIMIEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAQKTEEDMMKVRNLGRKSLEEVK
AKLEELGLSLRKDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgctggaaattgaaaagccgaaaatcgaaacggttgaaatcagcgaggatgccaaatat
ggcaaattcgtcgttgaaccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtatcctgttatcctcactccctggtgccgctgtaacatctgttcaaatagatggt
gtattgcacgagttttcaacaattgatggcgtcgtggaagatgtaacaacgatcatttta
aacattaaaaagctagcgctaaaaatttattcggacgaagaaaagacgcttgagattgat
gtacagggtgaaggagtcgttacagctgccgacattactcacgatagcgatgtagaaatt
ctcaatccagaccttcagattgctacattagcaaaagacggtcgtttacggatgagaatg
acagcaaaacgcggacgtgggtacacaccagctgacgctaacaagcgcgaggatcaaccg
ataggtgttatcccgatcgattccatttatacgccggtatcgcgcgtatcgtaccaagtc
gaaaatacgcgcgtcggtcaaatgacaaattacgacaagttaacgatcgacgtgtggaca
gatggtagcatcggcccgaaagaagcaatctcactaggggcaaaaattttaacagagcac
ttaaacatttttgtgaacttaacagatgaagcgcaacacgctgaaatcatgatcgaaaaa
gaagaagatcaaaaagaaaaagtgctcgagatgacaattgaagagcttgatctttctgtt
cgttcgtacaactgcttaaagcgtgctggcattaatacagtacaagagcttgcgcaaaaa
acagaggaagatatgatgaaagtgcgcaacttaggccgtaagtcgcttgaagaagtaaag
gcgaagttagaagagctaggattaagcttacgtaaagatgactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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