KEGG   Antarcticibacterium flavum: FHG64_00300
Entry
FHG64_00300       CDS       T06005                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
afla  Antarcticibacterium flavum
Pathway
afla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:afla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FHG64_00300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afla03019]
    FHG64_00300
   03009 Ribosome biogenesis [BR:afla03009]
    FHG64_00300
Enzymes [BR:afla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     FHG64_00300
Messenger RNA biogenesis [BR:afla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FHG64_00300
Ribosome biogenesis [BR:afla03009]
 Prokaryotic type
  rRNA helicases
   FHG64_00300
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD DUF5659 CMS1 UBA_5 Helicase_C_2 Frataxin_Cyay AAA_22
Other DBs
NCBI-ProteinID: QCY67958
UniProt: A0A5B7WZW0
Position
69541..70650
AA seq 369 aa
MGFTELGVSDDLIKGLEELGIKHPTPIQEAAIPVLSHQDVDFVGQAQTGTGKTAAFGLPI
LSRIDPGKDHIQALILAPTRELGQQIARQLFKFTKYSQKVFTEAVYGGEKIDIQISRLSR
PTHVVVATPGRLLDLLNKKALDISRINTLVLDEADEMLSMGFKDELTRILKKTSGNRNIW
LFSATIPKELDEIIEQYVAGDAVRVHINKSEAVNTGIEHQFVTGDDSNKLDTLAQFLKSQ
GKHRGIIFTRTKAVARVLAKQLEAKNYEVGLLEGDMMQKDRDKVMRAFKNKSLRILVSTD
VAARGIDVDNLAFVVHYQLPDQIDYYTHRSGRTARAGKKGISLVLVNKKELRRIWELEKA
LGIKFLKIK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgggatttacagaacttggagtatcagatgatctaataaaaggcctggaggaattgggg
attaaacatccaactccaatccaggaagcagctattcccgttctttcacaccaggatgtg
gacttcgtgggccaggcacaaacaggcaccggaaaaacagctgcttttggcctgccaatc
ctctcacgtattgaccccggtaaagatcacatccaggctttgatcctggcacctacaagg
gaacttgggcagcaaatagcccggcagctgtttaaatttacaaagtactctcaaaaagtt
ttcacagaggctgtttacggtggagaaaagatagatatccaaatttcccgtttgagtagg
cctacacatgtggtagtagcaactcccggcaggcttcttgaccttttgaataaaaaagct
ctggatatctccaggatcaatactctggtgctcgatgaagcagatgagatgttgagtatg
ggatttaaagatgagcttacacgtattttgaagaagaccagtggaaaccgaaatatttgg
ttgttctctgcaacaattcctaaggagctggacgaaattattgagcagtacgttgccggg
gatgcggttagggtgcatataaacaaatctgaagccgtaaacaccgggatcgagcaccag
ttcgtaacgggagatgacagtaataagctggatactcttgctcagttccttaaatcccag
ggaaagcatcgtgggattatcttcaccaggacaaaggcggttgcaagggtgctggcaaaa
caactggaggccaaaaactatgaggtaggtcttcttgaaggagatatgatgcaaaaagac
cgcgacaaggtgatgcgggcattcaaaaataaatcacttcgaatccttgtttctacagat
gtggctgccaggggaattgatgtagataatcttgcttttgtggttcattaccagttgcca
gatcaaattgattattacactcacaggagcgggaggaccgcccgtgccggtaagaaaggt
atttcacttgtcctggtcaataaaaaggaactaaggcgcatatgggaacttgaaaaagcc
cttggaattaagttccttaaaataaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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